Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.57□□□□□ -2.32
NPHP4O75161 SNORA50A-201ENST00000384225 134 ntBASIC0.57□□□□□ -2.32
NPHP4O75161 RNU6-136P-201ENST00000384663 107 ntBASIC0.57□□□□□ -2.32
NPHP4O75161 RNU6-332P-201ENST00000391193 108 ntBASIC0.57□□□□□ -2.32
NPHP4O75161 DAP3P1-201ENST00000441522 278 ntBASIC0.57□□□□□ -2.32
NPHP4O75161 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.57□□□□□ -2.32
NPHP4O75161 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
NPHP4O75161 RNA5SP255-201ENST00000516370 107 ntBASIC0.57□□□□□ -2.32
NPHP4O75161 RPL21P9-201ENST00000556149 474 ntBASIC0.57□□□□□ -2.32
NPHP4O75161 MIR5696-201ENST00000578474 85 ntBASIC0.57□□□□□ -2.32
NPHP4O75161 AC091178.2-201ENST00000584401 117 ntBASIC0.57□□□□□ -2.32
NPHP4O75161 MIR3192-201ENST00000584920 77 ntBASIC0.57□□□□□ -2.32
NPHP4O75161 AC124303.1-201ENST00000605703 360 ntBASIC0.57□□□□□ -2.32
NPHP4O75161 MIR6718-201ENST00000616153 80 ntBASIC0.57□□□□□ -2.32
NPHP4O75161 Y_RNA.38-201ENST00000362617 102 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 Y_RNA.48-201ENST00000362710 103 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 Y_RNA.212-201ENST00000364177 102 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 RNU6-1042P-201ENST00000384204 107 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 SNORD116-13-201ENST00000384408 92 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 RNU6-376P-201ENST00000384731 106 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.56□□□□□ -2.32
NPHP4O75161 MTCO3P19-201ENST00000415864 321 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 AC243428.1-201ENST00000421099 264 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 MTND3P23-201ENST00000431980 347 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.56□□□□□ -2.32
NPHP4O75161 Z98949.2-201ENST00000440996 144 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 AC233266.1-201ENST00000454518 96 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 LINC01399-202ENST00000458450 244 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.56□□□□□ -2.32
NPHP4O75161 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.56□□□□□ -2.32
NPHP4O75161 AC010486.3-201ENST00000511602 785 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 RNU7-175P-201ENST00000515915 61 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 RNA5SP20-201ENST00000515976 84 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 RNU6-273P-201ENST00000516937 96 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 AC134698.4-201ENST00000523451 826 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 AL357312.1-201ENST00000603879 298 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 AC092954.2-201ENST00000609103 430 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 AC242852.1-201ENST00000612151 96 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 DISC2.1-201ENST00000612827 205 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 AC244015.1-201ENST00000622301 99 ntBASIC0.56□□□□□ -2.32
NPHP4O75161 RNU6-1059P-201ENST00000363752 98 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 Y_RNA.330-201ENST00000365230 109 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 RNU6-281P-201ENST00000384212 103 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 RNU6-908P-201ENST00000410160 94 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 AC018865.2-201ENST00000423631 129 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 AL035398.1-201ENST00000430869 322 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 RNU7-90P-201ENST00000459216 62 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 HMGN2P26-201ENST00000463169 339 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 AL049830.1-201ENST00000468034 425 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.55□□□□□ -2.32
NPHP4O75161 AC019235.1-201ENST00000503847 207 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 Y_RNA.683-201ENST00000516508 93 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 RNU6-341P-201ENST00000516973 96 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.55□□□□□ -2.32
NPHP4O75161 AC093023.1-201ENST00000547375 507 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 MIR4273-201ENST00000582824 84 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 AL162413.1-201ENST00000603198 110 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 AC006435.5-201ENST00000624486 112 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
NPHP4O75161 Y_RNA.60-201ENST00000362831 98 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 Y_RNA.256-201ENST00000364594 104 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.55□□□□□ -2.32
NPHP4O75161 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.55□□□□□ -2.32
NPHP4O75161 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.55□□□□□ -2.32
NPHP4O75161 AC245047.8-201ENST00000456455 284 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 SNORD111.1-201ENST00000516421 86 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.55□□□□□ -2.32
NPHP4O75161 MIR3942-201ENST00000585264 109 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 AL357075.2-201ENST00000614906 189 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 AC087588.2-201ENST00000617667 426 ntBASIC0.55□□□□□ -2.32
NPHP4O75161 Y_RNA.135-201ENST00000363439 95 ntBASIC0.54□□□□□ -2.32
NPHP4O75161 Y_RNA.390-201ENST00000383932 102 ntBASIC0.54□□□□□ -2.32
NPHP4O75161 MIR329-2-201ENST00000385029 84 ntBASIC0.54□□□□□ -2.32
NPHP4O75161 RNU6-1001P-201ENST00000411265 100 ntBASIC0.54□□□□□ -2.32
NPHP4O75161 PIGPP3-201ENST00000425307 415 ntBASIC0.54□□□□□ -2.32
NPHP4O75161 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.54□□□□□ -2.32
NPHP4O75161 TRBVA-201ENST00000498804 316 ntBASIC0.54□□□□□ -2.32
NPHP4O75161 RNU4-57P-201ENST00000515980 135 ntBASIC0.54□□□□□ -2.32
NPHP4O75161 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.54□□□□□ -2.32
NPHP4O75161 AP002004.2-201ENST00000531656 154 ntBASIC0.54□□□□□ -2.32
NPHP4O75161 AC023827.1-201ENST00000569247 97 ntBASIC0.54□□□□□ -2.32
NPHP4O75161 MIR4636-201ENST00000582271 80 ntBASIC0.54□□□□□ -2.32
NPHP4O75161 AC004832.4-201ENST00000608952 331 ntBASIC0.54□□□□□ -2.32
NPHP4O75161 AL391903.3-201ENST00000612158 163 ntBASIC0.54□□□□□ -2.32
NPHP4O75161 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
NPHP4O75161 SNORA27.1-201ENST00000362604 124 ntBASIC0.53□□□□□ -2.32
NPHP4O75161 Y_RNA.106-201ENST00000363189 100 ntBASIC0.53□□□□□ -2.32
NPHP4O75161 SNORD116-11-201ENST00000383882 92 ntBASIC0.53□□□□□ -2.32
NPHP4O75161 RNA5SP482-201ENST00000391269 118 ntBASIC0.53□□□□□ -2.32
NPHP4O75161 ELOCP21-201ENST00000412558 336 ntBASIC0.53□□□□□ -2.32
NPHP4O75161 ZNF885P-201ENST00000420174 1098 ntBASIC0.53□□□□□ -2.32
NPHP4O75161 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.53□□□□□ -2.32
NPHP4O75161 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.53□□□□□ -2.32
NPHP4O75161 AC046134.1-201ENST00000514454 666 ntBASIC0.53□□□□□ -2.32
NPHP4O75161 RNU6-63P-201ENST00000516690 95 ntBASIC0.53□□□□□ -2.32
NPHP4O75161 RNU7-28P-201ENST00000516759 62 ntBASIC0.53□□□□□ -2.32
NPHP4O75161 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.53□□□□□ -2.32
NPHP4O75161 AL008636.1-201ENST00000625038 1018 ntBASIC0.53□□□□□ -2.32
NPHP4O75161 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms