Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-38P-201ENST00000384085 107 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 RN7SKP142-201ENST00000411236 328 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.35□□□□□ -2.35
SHOX2O60902 AL031667.1-201ENST00000440222 725 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 AP000870.1-201ENST00000472927 406 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 RN7SKP12-201ENST00000516275 143 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 AL358944.1-201ENST00000528537 144 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 AC109810.1-201ENST00000534066 224 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 AC026371.1-201ENST00000551867 419 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 AC091178.2-201ENST00000584401 117 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 AC093424.1-201ENST00000604999 338 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 AC092807.2-201ENST00000609367 243 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 AL158209.2-201ENST00000619266 216 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 AC091931.1-201ENST00000623488 728 ntBASIC0.35□□□□□ -2.35
SHOX2O60902 RNU6-128P-201ENST00000383976 107 ntBASIC0.34□□□□□ -2.36
SHOX2O60902 Y_RNA.476-201ENST00000384347 108 ntBASIC0.34□□□□□ -2.36
SHOX2O60902 RNU6-1237P-201ENST00000384777 107 ntBASIC0.34□□□□□ -2.36
SHOX2O60902 RNU6-159P-201ENST00000391080 106 ntBASIC0.34□□□□□ -2.36
SHOX2O60902 RNA5SP118-201ENST00000410385 109 ntBASIC0.34□□□□□ -2.36
SHOX2O60902 MTCYBP10-201ENST00000424905 650 ntBASIC0.34□□□□□ -2.36
SHOX2O60902 AL162725.1-201ENST00000435405 301 ntBASIC0.34□□□□□ -2.36
SHOX2O60902 RPS29P8-201ENST00000445109 171 ntBASIC0.34□□□□□ -2.36
SHOX2O60902 snoU13.25-201ENST00000458945 104 ntBASIC0.34□□□□□ -2.36
SHOX2O60902 RN7SKP287-201ENST00000516546 266 ntBASIC0.34□□□□□ -2.36
SHOX2O60902 RNU6-1332P-201ENST00000516666 104 ntBASIC0.34□□□□□ -2.36
SHOX2O60902 MIR3192-201ENST00000584920 77 ntBASIC0.34□□□□□ -2.36
SHOX2O60902 AC093913.1-201ENST00000614178 329 ntBASIC0.34□□□□□ -2.36
SHOX2O60902 7SK.10-201ENST00000621414 298 ntBASIC0.34□□□□□ -2.36
SHOX2O60902 SNORD114-31-201ENST00000363219 75 ntBASIC0.33□□□□□ -2.36
SHOX2O60902 SNORD113-7-201ENST00000363762 77 ntBASIC0.33□□□□□ -2.36
SHOX2O60902 Y_RNA.288-201ENST00000364854 92 ntBASIC0.33□□□□□ -2.36
SHOX2O60902 RNU6-790P-201ENST00000384479 105 ntBASIC0.33□□□□□ -2.36
SHOX2O60902 MIR526A1-201ENST00000384897 85 ntBASIC0.33□□□□□ -2.36
SHOX2O60902 RNU1-119P-201ENST00000391122 165 ntBASIC0.33□□□□□ -2.36
SHOX2O60902 Z82188.1-201ENST00000436709 154 ntBASIC0.33□□□□□ -2.36
SHOX2O60902 RNU6-261P-201ENST00000459506 102 ntBASIC0.33□□□□□ -2.36
SHOX2O60902 MTCO2P30-201ENST00000503662 364 ntBASIC0.33□□□□□ -2.36
SHOX2O60902 CYCTP-201ENST00000504253 315 ntBASIC0.33□□□□□ -2.36
SHOX2O60902 RNU6-1278P-201ENST00000516130 107 ntBASIC0.33□□□□□ -2.36
SHOX2O60902 AP001180.6-201ENST00000584918 159 ntBASIC0.33□□□□□ -2.36
SHOX2O60902 MIR6718-201ENST00000616153 80 ntBASIC0.33□□□□□ -2.36
SHOX2O60902 AC027279.3-201ENST00000625055 122 ntBASIC0.33□□□□□ -2.36
SHOX2O60902 MIR6516-201ENST00000630554 81 ntBASIC0.33□□□□□ -2.36
SHOX2O60902 Y_RNA.1-201ENST00000352915 104 ntBASIC0.32□□□□□ -2.36
SHOX2O60902 RNU6-376P-201ENST00000384731 106 ntBASIC0.32□□□□□ -2.36
SHOX2O60902 MIR520G-201ENST00000385064 90 ntBASIC0.32□□□□□ -2.36
SHOX2O60902 MTCYBP4-201ENST00000401524 249 ntBASIC0.32□□□□□ -2.36
SHOX2O60902 AL353193.1-201ENST00000421444 268 ntBASIC0.32□□□□□ -2.36
SHOX2O60902 DAP3P1-201ENST00000441522 278 ntBASIC0.32□□□□□ -2.36
SHOX2O60902 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.32□□□□□ -2.36
SHOX2O60902 AP003716.2-201ENST00000528260 108 ntBASIC0.32□□□□□ -2.36
SHOX2O60902 AC023827.1-201ENST00000569247 97 ntBASIC0.32□□□□□ -2.36
SHOX2O60902 AC009248.2-201ENST00000619826 254 ntBASIC0.32□□□□□ -2.36
SHOX2O60902 RNU6-46P-201ENST00000383860 107 ntBASIC0.31□□□□□ -2.36
SHOX2O60902 MIR452-201ENST00000385020 85 ntBASIC0.31□□□□□ -2.36
SHOX2O60902 MIR601-201ENST00000385256 79 ntBASIC0.31□□□□□ -2.36
SHOX2O60902 AL445567.1-201ENST00000439121 144 ntBASIC0.31□□□□□ -2.36
SHOX2O60902 AC104383.1-201ENST00000530297 370 ntBASIC0.31□□□□□ -2.36
SHOX2O60902 MIR4528-201ENST00000577763 90 ntBASIC0.31□□□□□ -2.36
SHOX2O60902 AC073648.5-201ENST00000603502 305 ntBASIC0.31□□□□□ -2.36
SHOX2O60902 AC007684.1-201ENST00000609671 477 ntBASIC0.31□□□□□ -2.36
SHOX2O60902 Z69908.1-201ENST00000622603 247 ntBASIC0.31□□□□□ -2.36
SHOX2O60902 SNORA20B-201ENST00000384220 132 ntBASIC0.3□□□□□ -2.36
SHOX2O60902 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.3□□□□□ -2.36
SHOX2O60902 AC091144.1-201ENST00000519573 138 ntBASIC0.3□□□□□ -2.36
SHOX2O60902 AC134698.4-201ENST00000523451 826 ntBASIC0.3□□□□□ -2.36
SHOX2O60902 POLR3GP2-201ENST00000588366 668 ntBASIC0.3□□□□□ -2.36
SHOX2O60902 AC120024.3-201ENST00000603167 156 ntBASIC0.3□□□□□ -2.36
SHOX2O60902 AC010999.1-201ENST00000611856 324 ntBASIC0.3□□□□□ -2.36
SHOX2O60902 AL138726.1-201ENST00000614873 333 ntBASIC0.3□□□□□ -2.36
SHOX2O60902 U4.2-201ENST00000618561 85 ntBASIC0.3□□□□□ -2.36
SHOX2O60902 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.3□□□□□ -2.36
SHOX2O60902 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
SHOX2O60902 Y_RNA.296-201ENST00000364930 108 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 RNU4-20P-201ENST00000365601 151 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 RNU6-348P-201ENST00000384386 107 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 SNORD111-201ENST00000408139 94 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 RNU5A-5P-201ENST00000411054 116 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 ZNF885P-201ENST00000420174 1098 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 AC018865.2-201ENST00000423631 129 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 AC244098.3-201ENST00000424803 96 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.29□□□□□ -2.36
SHOX2O60902 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.29□□□□□ -2.36
SHOX2O60902 PCMTD1P1-201ENST00000455560 355 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 AC083798.1-201ENST00000472671 131 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 AC107401.1-201ENST00000503426 685 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 RNA5SP20-201ENST00000515976 84 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 RNU6-1291P-201ENST00000516591 104 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 RNU6-107P-201ENST00000516643 102 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 MTND1P24-201ENST00000552175 861 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 UBL5P4-201ENST00000562584 236 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 AC011195.1-201ENST00000578177 177 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 AP001330.5-201ENST00000607176 411 ntBASIC0.29□□□□□ -2.36
SHOX2O60902 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
SHOX2O60902 SNORA27.1-201ENST00000362604 124 ntBASIC0.28□□□□□ -2.36
SHOX2O60902 RNA5SP48-201ENST00000363969 126 ntBASIC0.28□□□□□ -2.36
SHOX2O60902 RNU6-407P-201ENST00000365280 104 ntBASIC0.28□□□□□ -2.36
SHOX2O60902 Y_RNA.381-201ENST00000365666 102 ntBASIC0.28□□□□□ -2.36
SHOX2O60902 MIR15B-201ENST00000385045 98 ntBASIC0.28□□□□□ -2.36
SHOX2O60902 RNU6-994P-201ENST00000410507 111 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms