Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.63□□□□□ -2.15
SSX4O60224 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.63□□□□□ -2.15
SSX4O60224 MTCYBP6-201ENST00000441810 138 ntBASIC1.63□□□□□ -2.15
SSX4O60224 AC025465.3-201ENST00000510570 311 ntBASIC1.63□□□□□ -2.15
SSX4O60224 RNU6-436P-201ENST00000516171 114 ntBASIC1.63□□□□□ -2.15
SSX4O60224 Y_RNA.676-201ENST00000516393 96 ntBASIC1.63□□□□□ -2.15
SSX4O60224 Y_RNA.713-201ENST00000517013 96 ntBASIC1.63□□□□□ -2.15
SSX4O60224 AC044792.1-201ENST00000593294 196 ntBASIC1.63□□□□□ -2.15
SSX4O60224 AL356055.1-201ENST00000602528 446 ntBASIC1.63□□□□□ -2.15
SSX4O60224 MIR8074-201ENST00000615081 81 ntBASIC1.63□□□□□ -2.15
SSX4O60224 AC127459.3-201ENST00000624328 466 ntBASIC1.63□□□□□ -2.15
SSX4O60224 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SSX4O60224 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SSX4O60224 ZNF355P-201ENST00000427301 3216 ntBASIC1.62□□□□□ -2.15
SSX4O60224 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.62□□□□□ -2.15
SSX4O60224 RNU6-937P-201ENST00000384325 106 ntBASIC1.62□□□□□ -2.15
SSX4O60224 RNU6-505P-201ENST00000384427 107 ntBASIC1.62□□□□□ -2.15
SSX4O60224 RNU6-376P-201ENST00000384731 106 ntBASIC1.62□□□□□ -2.15
SSX4O60224 RNU6-101P-201ENST00000410323 104 ntBASIC1.62□□□□□ -2.15
SSX4O60224 COX6CP10-201ENST00000416832 224 ntBASIC1.62□□□□□ -2.15
SSX4O60224 AC010154.1-201ENST00000425857 269 ntBASIC1.62□□□□□ -2.15
SSX4O60224 AC245047.3-201ENST00000429428 127 ntBASIC1.62□□□□□ -2.15
SSX4O60224 AC003989.2-201ENST00000440224 169 ntBASIC1.62□□□□□ -2.15
SSX4O60224 RNU7-94P-201ENST00000459576 63 ntBASIC1.62□□□□□ -2.15
SSX4O60224 SNORA70.12-201ENST00000516084 153 ntBASIC1.62□□□□□ -2.15
SSX4O60224 Y_RNA.715-201ENST00000517082 110 ntBASIC1.62□□□□□ -2.15
SSX4O60224 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.62□□□□□ -2.15
SSX4O60224 RPL21P9-201ENST00000556149 474 ntBASIC1.62□□□□□ -2.15
SSX4O60224 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.62□□□□□ -2.15
SSX4O60224 AC040896.1-201ENST00000613819 479 ntBASIC1.62□□□□□ -2.15
SSX4O60224 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.62□□□□□ -2.15
SSX4O60224 Y_RNA.202-201ENST00000364083 110 ntBASIC1.61□□□□□ -2.15
SSX4O60224 RNU4-76P-201ENST00000364509 141 ntBASIC1.61□□□□□ -2.15
SSX4O60224 SNORA16.1-201ENST00000364597 132 ntBASIC1.61□□□□□ -2.15
SSX4O60224 RNU6-117P-201ENST00000365415 107 ntBASIC1.61□□□□□ -2.15
SSX4O60224 SNORD63-201ENST00000384262 68 ntBASIC1.61□□□□□ -2.15
SSX4O60224 MIR30A-201ENST00000385092 71 ntBASIC1.61□□□□□ -2.15
SSX4O60224 AL390729.2-201ENST00000416137 156 ntBASIC1.61□□□□□ -2.15
SSX4O60224 AC005534.2-201ENST00000431047 433 ntBASIC1.61□□□□□ -2.15
SSX4O60224 AC005042.3-201ENST00000453230 174 ntBASIC1.61□□□□□ -2.15
SSX4O60224 RNU6-1278P-201ENST00000516130 107 ntBASIC1.61□□□□□ -2.15
SSX4O60224 RNU6-397P-201ENST00000516226 104 ntBASIC1.61□□□□□ -2.15
SSX4O60224 SNORA31.10-201ENST00000516482 106 ntBASIC1.61□□□□□ -2.15
SSX4O60224 SNORA25.15-201ENST00000516487 89 ntBASIC1.61□□□□□ -2.15
SSX4O60224 RNU6-63P-201ENST00000516690 95 ntBASIC1.61□□□□□ -2.15
SSX4O60224 RNU7-110P-201ENST00000516891 62 ntBASIC1.61□□□□□ -2.15
SSX4O60224 SNORA44.1-201ENST00000517031 108 ntBASIC1.61□□□□□ -2.15
SSX4O60224 Y_RNA.721-201ENST00000517207 102 ntBASIC1.61□□□□□ -2.15
SSX4O60224 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.61□□□□□ -2.15
SSX4O60224 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.61□□□□□ -2.15
SSX4O60224 MIR4709-201ENST00000577272 72 ntBASIC1.61□□□□□ -2.15
SSX4O60224 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.61□□□□□ -2.15
SSX4O60224 AL929325.1-201ENST00000603096 117 ntBASIC1.61□□□□□ -2.15
SSX4O60224 AC016925.2-201ENST00000605108 242 ntBASIC1.61□□□□□ -2.15
SSX4O60224 AC011373.1-201ENST00000607270 237 ntBASIC1.61□□□□□ -2.15
SSX4O60224 MIR8054-201ENST00000620877 86 ntBASIC1.61□□□□□ -2.15
SSX4O60224 AC095038.3-201ENST00000634439 195 ntBASIC1.61□□□□□ -2.15
SSX4O60224 MIR6079-201ENST00000635807 62 ntBASIC1.61□□□□□ -2.15
SSX4O60224 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.61□□□□□ -2.15
SSX4O60224 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SSX4O60224 AC100821.1-201ENST00000523153 2479 ntBASIC1.6□□□□□ -2.15
SSX4O60224 MIR424-201ENST00000362227 98 ntBASIC1.6□□□□□ -2.15
SSX4O60224 Y_RNA.158-201ENST00000363651 101 ntBASIC1.6□□□□□ -2.15
SSX4O60224 Y_RNA.331-201ENST00000365267 102 ntBASIC1.6□□□□□ -2.15
SSX4O60224 SNORA63.7-201ENST00000365579 123 ntBASIC1.6□□□□□ -2.15
SSX4O60224 RNU6-1227P-201ENST00000383981 107 ntBASIC1.6□□□□□ -2.15
SSX4O60224 RNU6-136P-201ENST00000384663 107 ntBASIC1.6□□□□□ -2.15
SSX4O60224 MIR1267-201ENST00000408723 78 ntBASIC1.6□□□□□ -2.15
SSX4O60224 MIR1252-201ENST00000408861 65 ntBASIC1.6□□□□□ -2.15
SSX4O60224 RPL23AP36-201ENST00000413895 458 ntBASIC1.6□□□□□ -2.15
SSX4O60224 FTH1P12-201ENST00000432137 551 ntBASIC1.6□□□□□ -2.15
SSX4O60224 JTBP1-201ENST00000441314 247 ntBASIC1.6□□□□□ -2.15
SSX4O60224 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.6□□□□□ -2.15
SSX4O60224 RNU7-34P-201ENST00000459394 64 ntBASIC1.6□□□□□ -2.15
SSX4O60224 AC091021.1-201ENST00000468051 388 ntBASIC1.6□□□□□ -2.15
SSX4O60224 AC005908.1-201ENST00000468701 347 ntBASIC1.6□□□□□ -2.15
SSX4O60224 AC108729.3-201ENST00000513484 108 ntBASIC1.6□□□□□ -2.15
SSX4O60224 RNU6-1337P-201ENST00000516525 95 ntBASIC1.6□□□□□ -2.15
SSX4O60224 RNU6-1046P-201ENST00000516538 107 ntBASIC1.6□□□□□ -2.15
SSX4O60224 CBX3P4-201ENST00000538909 354 ntBASIC1.6□□□□□ -2.15
SSX4O60224 MIR4419B-201ENST00000577260 68 ntBASIC1.6□□□□□ -2.15
SSX4O60224 RAC1P9-201ENST00000604990 392 ntBASIC1.6□□□□□ -2.15
SSX4O60224 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.6□□□□□ -2.15
SSX4O60224 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.6□□□□□ -2.15
SSX4O60224 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SSX4O60224 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SSX4O60224 Y_RNA.164-201ENST00000363709 102 ntBASIC1.59□□□□□ -2.15
SSX4O60224 Y_RNA.329-201ENST00000365209 107 ntBASIC1.59□□□□□ -2.15
SSX4O60224 AC117470.1-201ENST00000381974 330 ntBASIC1.59□□□□□ -2.15
SSX4O60224 RNU6-203P-201ENST00000384038 104 ntBASIC1.59□□□□□ -2.15
SSX4O60224 Y_RNA.527-201ENST00000384573 102 ntBASIC1.59□□□□□ -2.15
SSX4O60224 RNU6-950P-201ENST00000384651 107 ntBASIC1.59□□□□□ -2.15
SSX4O60224 RNU6-440P-201ENST00000390882 105 ntBASIC1.59□□□□□ -2.15
SSX4O60224 RNU4-30P-201ENST00000410245 143 ntBASIC1.59□□□□□ -2.15
SSX4O60224 RNU2-61P-201ENST00000411069 191 ntBASIC1.59□□□□□ -2.15
SSX4O60224 AC108667.1-201ENST00000428618 249 ntBASIC1.59□□□□□ -2.15
SSX4O60224 AC136932.1-201ENST00000574771 208 ntBASIC1.59□□□□□ -2.15
SSX4O60224 SNORA77B-201ENST00000578179 125 ntBASIC1.59□□□□□ -2.15
SSX4O60224 MIR4680-201ENST00000580906 66 ntBASIC1.59□□□□□ -2.15
SSX4O60224 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms