Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
MSI1O43347 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MSI1O43347 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.11□□□□□ -2.07
MSI1O43347 SNORA3A-201ENST00000364113 130 ntBASIC2.11□□□□□ -2.07
MSI1O43347 RNA5SP160-201ENST00000364866 120 ntBASIC2.11□□□□□ -2.07
MSI1O43347 Y_RNA.416-201ENST00000384014 113 ntBASIC2.11□□□□□ -2.07
MSI1O43347 SNORA6-201ENST00000384033 151 ntBASIC2.11□□□□□ -2.07
MSI1O43347 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
MSI1O43347 AL353689.1-201ENST00000438895 199 ntBASIC2.11□□□□□ -2.07
MSI1O43347 SUMO1P2-201ENST00000452524 304 ntBASIC2.11□□□□□ -2.07
MSI1O43347 RNU6-717P-201ENST00000459076 104 ntBASIC2.11□□□□□ -2.07
MSI1O43347 AC108729.3-201ENST00000513484 108 ntBASIC2.11□□□□□ -2.07
MSI1O43347 RNU6-1041P-201ENST00000516254 102 ntBASIC2.11□□□□□ -2.07
MSI1O43347 SUMO2P18-201ENST00000518873 252 ntBASIC2.11□□□□□ -2.07
MSI1O43347 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.11□□□□□ -2.07
MSI1O43347 AC037487.3-201ENST00000606668 112 ntBASIC2.11□□□□□ -2.07
MSI1O43347 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.11□□□□□ -2.07
MSI1O43347 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.11□□□□□ -2.07
MSI1O43347 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.11□□□□□ -2.07
MSI1O43347 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.1□□□□□ -2.07
MSI1O43347 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.1□□□□□ -2.07
MSI1O43347 snoU2-30.2-201ENST00000362805 70 ntBASIC2.1□□□□□ -2.07
MSI1O43347 RNU6-23P-201ENST00000363283 107 ntBASIC2.1□□□□□ -2.07
MSI1O43347 RNA5SP138-201ENST00000365098 114 ntBASIC2.1□□□□□ -2.07
MSI1O43347 Y_RNA.352-201ENST00000365439 102 ntBASIC2.1□□□□□ -2.07
MSI1O43347 Y_RNA.508-201ENST00000384502 114 ntBASIC2.1□□□□□ -2.07
MSI1O43347 MIR29C-201ENST00000385231 88 ntBASIC2.1□□□□□ -2.07
MSI1O43347 HMGN2P39-201ENST00000398005 273 ntBASIC2.1□□□□□ -2.07
MSI1O43347 AL117342.1-201ENST00000404861 406 ntBASIC2.1□□□□□ -2.07
MSI1O43347 MIR1283-2-201ENST00000408621 87 ntBASIC2.1□□□□□ -2.07
MSI1O43347 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.1□□□□□ -2.07
MSI1O43347 RPS26P55-201ENST00000471178 356 ntBASIC2.1□□□□□ -2.07
MSI1O43347 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.1□□□□□ -2.07
MSI1O43347 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
MSI1O43347 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
MSI1O43347 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
MSI1O43347 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
MSI1O43347 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.09□□□□□ -2.07
MSI1O43347 WWP1P1-201ENST00000466609 2769 ntBASIC2.09□□□□□ -2.07
MSI1O43347 RNU1-58P-201ENST00000362413 163 ntBASIC2.09□□□□□ -2.07
MSI1O43347 SNORD114-7-201ENST00000362520 77 ntBASIC2.09□□□□□ -2.07
MSI1O43347 Y_RNA.44-201ENST00000362676 108 ntBASIC2.09□□□□□ -2.07
MSI1O43347 Y_RNA.172-201ENST00000363765 102 ntBASIC2.09□□□□□ -2.07
MSI1O43347 RNU6-379P-201ENST00000363813 104 ntBASIC2.09□□□□□ -2.07
MSI1O43347 Y_RNA.277-201ENST00000364754 102 ntBASIC2.09□□□□□ -2.07
MSI1O43347 RNU6-407P-201ENST00000365280 104 ntBASIC2.09□□□□□ -2.07
MSI1O43347 RNU6-514P-201ENST00000384208 107 ntBASIC2.09□□□□□ -2.07
MSI1O43347 Y_RNA.539-201ENST00000384635 107 ntBASIC2.09□□□□□ -2.07
MSI1O43347 MIR518A2-201ENST00000384966 87 ntBASIC2.09□□□□□ -2.07
MSI1O43347 MIR548H3-201ENST00000408771 118 ntBASIC2.09□□□□□ -2.07
MSI1O43347 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.09□□□□□ -2.07
MSI1O43347 RNU6-1053P-201ENST00000515930 101 ntBASIC2.09□□□□□ -2.07
MSI1O43347 RNA5SP20-201ENST00000515976 84 ntBASIC2.09□□□□□ -2.07
MSI1O43347 RNU6-1023P-201ENST00000516137 106 ntBASIC2.09□□□□□ -2.07
MSI1O43347 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.09□□□□□ -2.07
MSI1O43347 MIR4643-201ENST00000577473 78 ntBASIC2.09□□□□□ -2.07
MSI1O43347 AC002984.1-201ENST00000591692 448 ntBASIC2.09□□□□□ -2.07
MSI1O43347 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.09□□□□□ -2.07
MSI1O43347 AL353149.1-201ENST00000610667 244 ntBASIC2.09□□□□□ -2.07
MSI1O43347 AC006435.5-201ENST00000624486 112 ntBASIC2.09□□□□□ -2.07
MSI1O43347 MIR338-201ENST00000636369 67 ntBASIC2.09□□□□□ -2.07
MSI1O43347 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.08□□□□□ -2.08
MSI1O43347 UBE2WP1-201ENST00000362030 340 ntBASIC2.08□□□□□ -2.08
MSI1O43347 Y_RNA.20-201ENST00000362479 113 ntBASIC2.08□□□□□ -2.08
MSI1O43347 SNORA33-201ENST00000363664 130 ntBASIC2.08□□□□□ -2.08
MSI1O43347 SNORD27-201ENST00000363981 72 ntBASIC2.08□□□□□ -2.08
MSI1O43347 Y_RNA.275-201ENST00000364726 110 ntBASIC2.08□□□□□ -2.08
MSI1O43347 RNU6-662P-201ENST00000384253 104 ntBASIC2.08□□□□□ -2.08
MSI1O43347 RNU6-417P-201ENST00000384712 107 ntBASIC2.08□□□□□ -2.08
MSI1O43347 MIR597-201ENST00000384968 97 ntBASIC2.08□□□□□ -2.08
MSI1O43347 RNU6-651P-201ENST00000411040 105 ntBASIC2.08□□□□□ -2.08
MSI1O43347 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.08□□□□□ -2.08
MSI1O43347 ATP5J2P3-201ENST00000451550 258 ntBASIC2.08□□□□□ -2.08
MSI1O43347 AL021397.1-201ENST00000451806 248 ntBASIC2.08□□□□□ -2.08
MSI1O43347 HMGN2P23-201ENST00000456759 269 ntBASIC2.08□□□□□ -2.08
MSI1O43347 RPS27P22-201ENST00000478056 241 ntBASIC2.08□□□□□ -2.08
MSI1O43347 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.08□□□□□ -2.08
MSI1O43347 SNORA70.12-201ENST00000516084 153 ntBASIC2.08□□□□□ -2.08
MSI1O43347 SNORA27.4-201ENST00000516650 95 ntBASIC2.08□□□□□ -2.08
MSI1O43347 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.08□□□□□ -2.08
MSI1O43347 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
MSI1O43347 CENPCP1-201ENST00000533085 2578 ntBASIC2.07□□□□□ -2.08
MSI1O43347 AL356292.1-201ENST00000283110 373 ntBASIC2.07□□□□□ -2.08
MSI1O43347 Y_RNA.54-201ENST00000362766 105 ntBASIC2.07□□□□□ -2.08
MSI1O43347 Y_RNA.117-201ENST00000363294 101 ntBASIC2.07□□□□□ -2.08
MSI1O43347 RNU1-22P-201ENST00000363334 158 ntBASIC2.07□□□□□ -2.08
MSI1O43347 RNU6-271P-201ENST00000363858 105 ntBASIC2.07□□□□□ -2.08
MSI1O43347 Y_RNA.217-201ENST00000364214 105 ntBASIC2.07□□□□□ -2.08
MSI1O43347 RNU6-740P-201ENST00000364734 105 ntBASIC2.07□□□□□ -2.08
MSI1O43347 MIR1253-201ENST00000408273 105 ntBASIC2.07□□□□□ -2.08
MSI1O43347 AC099677.2-201ENST00000436385 175 ntBASIC2.07□□□□□ -2.08
MSI1O43347 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.07□□□□□ -2.08
MSI1O43347 Y_RNA.641-201ENST00000459414 105 ntBASIC2.07□□□□□ -2.08
MSI1O43347 RNU6-1337P-201ENST00000516525 95 ntBASIC2.07□□□□□ -2.08
MSI1O43347 RNU7-128P-201ENST00000517247 62 ntBASIC2.07□□□□□ -2.08
MSI1O43347 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.07□□□□□ -2.08
MSI1O43347 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.07□□□□□ -2.08
MSI1O43347 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
MSI1O43347 MIR3671-201ENST00000580455 88 ntBASIC2.07□□□□□ -2.08
MSI1O43347 MIR4438-201ENST00000585271 93 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms