Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 RNU6-966P-201ENST00000516479 104 ntBASIC1.55□□□□□ -2.16
AP3D1O14617 RNU6-1337P-201ENST00000516525 95 ntBASIC1.55□□□□□ -2.16
AP3D1O14617 RNU6-1291P-201ENST00000516591 104 ntBASIC1.55□□□□□ -2.16
AP3D1O14617 MIR4423-201ENST00000580922 80 ntBASIC1.55□□□□□ -2.16
AP3D1O14617 SNORD58B-201ENST00000607313 66 ntBASIC1.55□□□□□ -2.16
AP3D1O14617 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.55□□□□□ -2.16
AP3D1O14617 SNORD3E-202ENST00000627253 216 ntBASIC1.55□□□□□ -2.16
AP3D1O14617 AL161722.3-201ENST00000605789 2983 ntBASIC1.55□□□□□ -2.16
AP3D1O14617 Y_RNA.112-201ENST00000363250 102 ntBASIC1.54□□□□□ -2.16
AP3D1O14617 RNU6-424P-201ENST00000384367 105 ntBASIC1.54□□□□□ -2.16
AP3D1O14617 Y_RNA.509-201ENST00000384506 99 ntBASIC1.54□□□□□ -2.16
AP3D1O14617 Y_RNA.570-201ENST00000384750 101 ntBASIC1.54□□□□□ -2.16
AP3D1O14617 MIR1289-2-201ENST00000408360 111 ntBASIC1.54□□□□□ -2.16
AP3D1O14617 MIR1261-201ENST00000408659 82 ntBASIC1.54□□□□□ -2.16
AP3D1O14617 RNU6-955P-201ENST00000410497 104 ntBASIC1.54□□□□□ -2.16
AP3D1O14617 AL160004.2-201ENST00000432935 350 ntBASIC1.54□□□□□ -2.16
AP3D1O14617 AL162725.1-201ENST00000435405 301 ntBASIC1.54□□□□□ -2.16
AP3D1O14617 RNU6-155P-201ENST00000516347 100 ntBASIC1.54□□□□□ -2.16
AP3D1O14617 RNU6-250P-201ENST00000516958 103 ntBASIC1.54□□□□□ -2.16
AP3D1O14617 RNU6-1096P-201ENST00000517089 102 ntBASIC1.54□□□□□ -2.16
AP3D1O14617 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.54□□□□□ -2.16
AP3D1O14617 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.54□□□□□ -2.16
AP3D1O14617 AL080274.1-201ENST00000605565 220 ntBASIC1.54□□□□□ -2.16
AP3D1O14617 RNY1P14-201ENST00000384426 108 ntBASIC1.53□□□□□ -2.16
AP3D1O14617 RNA5SP482-201ENST00000391269 118 ntBASIC1.53□□□□□ -2.16
AP3D1O14617 RNA5SP511-201ENST00000410487 115 ntBASIC1.53□□□□□ -2.16
AP3D1O14617 RN7SKP51-201ENST00000410781 304 ntBASIC1.53□□□□□ -2.16
AP3D1O14617 snoU13.26-201ENST00000459452 105 ntBASIC1.53□□□□□ -2.16
AP3D1O14617 RPL39P38-201ENST00000467018 153 ntBASIC1.53□□□□□ -2.16
AP3D1O14617 RNU6-436P-201ENST00000516171 114 ntBASIC1.53□□□□□ -2.16
AP3D1O14617 RNA5SP168-201ENST00000516642 112 ntBASIC1.53□□□□□ -2.16
AP3D1O14617 RNU6-295P-201ENST00000516901 104 ntBASIC1.53□□□□□ -2.16
AP3D1O14617 RN7SKP295-201ENST00000517264 153 ntBASIC1.53□□□□□ -2.16
AP3D1O14617 AL512310.8-201ENST00000550183 120 ntBASIC1.53□□□□□ -2.16
AP3D1O14617 AC015720.1-201ENST00000565251 277 ntBASIC1.53□□□□□ -2.16
AP3D1O14617 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
AP3D1O14617 Y_RNA.395-201ENST00000383945 109 ntBASIC1.52□□□□□ -2.17
AP3D1O14617 Y_RNA.458-201ENST00000384240 102 ntBASIC1.52□□□□□ -2.17
AP3D1O14617 AL627390.1-201ENST00000396055 340 ntBASIC1.52□□□□□ -2.17
AP3D1O14617 SNORA11.2-201ENST00000408318 127 ntBASIC1.52□□□□□ -2.17
AP3D1O14617 AC022028.1-201ENST00000412054 408 ntBASIC1.52□□□□□ -2.17
AP3D1O14617 AL354751.2-201ENST00000415471 210 ntBASIC1.52□□□□□ -2.17
AP3D1O14617 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.52□□□□□ -2.17
AP3D1O14617 CALM2P4-201ENST00000430810 426 ntBASIC1.52□□□□□ -2.17
AP3D1O14617 AL135790.2-201ENST00000437701 267 ntBASIC1.52□□□□□ -2.17
AP3D1O14617 RPS29P23-201ENST00000458635 123 ntBASIC1.52□□□□□ -2.17
AP3D1O14617 RPL30P7-201ENST00000479312 323 ntBASIC1.52□□□□□ -2.17
AP3D1O14617 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.52□□□□□ -2.17
AP3D1O14617 C8orf59P2-201ENST00000603441 271 ntBASIC1.52□□□□□ -2.17
AP3D1O14617 AL121655.1-201ENST00000605811 308 ntBASIC1.52□□□□□ -2.17
AP3D1O14617 MIR502-201ENST00000606349 86 ntBASIC1.52□□□□□ -2.17
AP3D1O14617 AC005592.1-201ENST00000566527 1640 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 RNU6-1175P-201ENST00000365200 107 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 SNORD26-201ENST00000384147 75 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 Y_RNA.462-201ENST00000384268 102 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 RNU6-136P-201ENST00000384663 107 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 MIR504-201ENST00000385065 83 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 U8.16-201ENST00000391279 133 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 RN7SKP101-201ENST00000411376 320 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 RPL30P13-201ENST00000418873 348 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 CYCSP49-201ENST00000420810 319 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 AL049830.1-201ENST00000468034 425 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.51□□□□□ -2.17
AP3D1O14617 RNU6-1170P-201ENST00000515974 106 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 RNU6-475P-201ENST00000516073 104 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 Y_RNA.772-201ENST00000606692 102 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 uc_338.22-201ENST00000622722 187 ntBASIC1.51□□□□□ -2.17
AP3D1O14617 RNU6-324P-201ENST00000363957 106 ntBASIC1.5□□□□□ -2.17
AP3D1O14617 RNU4-76P-201ENST00000364509 141 ntBASIC1.5□□□□□ -2.17
AP3D1O14617 Y_RNA.431-201ENST00000384086 102 ntBASIC1.5□□□□□ -2.17
AP3D1O14617 SNORD116-13-201ENST00000384408 92 ntBASIC1.5□□□□□ -2.17
AP3D1O14617 AC005042.3-201ENST00000453230 174 ntBASIC1.5□□□□□ -2.17
AP3D1O14617 AC233266.1-201ENST00000454518 96 ntBASIC1.5□□□□□ -2.17
AP3D1O14617 AC092991.1-201ENST00000477176 376 ntBASIC1.5□□□□□ -2.17
AP3D1O14617 AC093852.1-201ENST00000503587 266 ntBASIC1.5□□□□□ -2.17
AP3D1O14617 MIR3664-201ENST00000579074 99 ntBASIC1.5□□□□□ -2.17
AP3D1O14617 RPS29P30-201ENST00000600975 111 ntBASIC1.5□□□□□ -2.17
AP3D1O14617 AC242852.1-201ENST00000612151 96 ntBASIC1.5□□□□□ -2.17
AP3D1O14617 AC244015.1-201ENST00000622301 99 ntBASIC1.5□□□□□ -2.17
AP3D1O14617 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.5□□□□□ -2.17
AP3D1O14617 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
AP3D1O14617 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
AP3D1O14617 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
AP3D1O14617 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
AP3D1O14617 MIRLET7C-201ENST00000362160 84 ntBASIC1.49□□□□□ -2.17
AP3D1O14617 Y_RNA.80-201ENST00000362996 102 ntBASIC1.49□□□□□ -2.17
AP3D1O14617 SNORD42.2-201ENST00000365570 69 ntBASIC1.49□□□□□ -2.17
AP3D1O14617 Y_RNA.485-201ENST00000384395 102 ntBASIC1.49□□□□□ -2.17
AP3D1O14617 Y_RNA.526-201ENST00000384572 110 ntBASIC1.49□□□□□ -2.17
AP3D1O14617 AL390729.2-201ENST00000416137 156 ntBASIC1.49□□□□□ -2.17
AP3D1O14617 RPS4XP11-201ENST00000446897 772 ntBASIC1.49□□□□□ -2.17
AP3D1O14617 Y_RNA.639-201ENST00000458981 102 ntBASIC1.49□□□□□ -2.17
AP3D1O14617 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
AP3D1O14617 CYP3A52P-201ENST00000563326 91 ntBASIC1.49□□□□□ -2.17
AP3D1O14617 MIR4778-201ENST00000577635 80 ntBASIC1.49□□□□□ -2.17
AP3D1O14617 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.49□□□□□ -2.17
AP3D1O14617 AC006157.1-201ENST00000611750 366 ntBASIC1.49□□□□□ -2.17
AP3D1O14617 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
AP3D1O14617 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms