Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 RNU1-115P-201ENST00000365329 160 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 SNORD42.2-201ENST00000365570 69 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 Y_RNA.395-201ENST00000383945 109 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 Y_RNA.419-201ENST00000384041 102 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR499A-201ENST00000384903 122 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 MTCO3P19-201ENST00000415864 321 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 AL137792.2-201ENST00000443484 235 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU1-123P-201ENST00000458950 160 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 AC099513.1-201ENST00000490423 301 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 AC097462.1-201ENST00000514125 324 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 RNA5SP20-201ENST00000515976 84 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 AC006600.1-201ENST00000572529 153 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 AL390123.1-201ENST00000603216 237 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 SNORD58B-201ENST00000607313 66 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 AC011476.5-201ENST00000615594 130 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 uc_338.22-201ENST00000622722 187 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-626P-201ENST00000363354 107 ntBASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 RNY1P14-201ENST00000384426 108 ntBASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 SNORA12.1-201ENST00000390873 148 ntBASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 SNORD78.2-201ENST00000391076 69 ntBASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-1199P-201ENST00000411249 104 ntBASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 AC010154.1-201ENST00000425857 269 ntBASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 FTH1P12-201ENST00000432137 551 ntBASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-966P-201ENST00000516479 104 ntBASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 AC023442.1-201ENST00000531247 422 ntBASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 AL929325.1-201ENST00000603096 117 ntBASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 AL050343.2-201ENST00000607338 280 ntBASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 AC240442.1-201ENST00000616055 283 ntBASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 AC100821.1-201ENST00000523153 2479 ntBASIC1.37□□□□□ -2.19
NEDD8-MDP1E9PL57 SNORD114-7-201ENST00000362520 77 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 Y_RNA.80-201ENST00000362996 102 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 Y_RNA.112-201ENST00000363250 102 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 Y_RNA.124-201ENST00000363339 93 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 SNORD115-30-201ENST00000364117 82 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-117P-201ENST00000365415 107 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-20P-201ENST00000384106 107 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 Y_RNA.485-201ENST00000384395 102 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR1267-201ENST00000408723 78 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 AC004223.1-201ENST00000479840 271 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 Y_RNA.661-201ENST00000516003 99 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU7-172P-201ENST00000517125 64 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 AC091178.2-201ENST00000584401 117 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 AC073413.2-201ENST00000604332 360 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR6078-201ENST00000611069 100 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 AC010205.1-201ENST00000616668 449 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR8054-201ENST00000620877 86 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 AC091895.1-201ENST00000624494 256 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 AL606534.2-204ENST00000635008 178 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 AL161722.3-201ENST00000605789 2983 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 AC018630.2-201ENST00000534866 2403 ntBASIC1.36□□□□□ -2.19
NEDD8-MDP1E9PL57 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-271P-201ENST00000363858 105 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-407P-201ENST00000365280 104 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR628-201ENST00000385229 95 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-440P-201ENST00000390882 105 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR873-201ENST00000401120 77 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 MRPL42P3-201ENST00000401492 326 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 COX6CP10-201ENST00000416832 224 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 snoU13.9-201ENST00000458927 103 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 Y_RNA.639-201ENST00000458981 102 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 SNORA40.14-201ENST00000516543 86 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR4709-201ENST00000577272 72 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 AC015688.6-201ENST00000577737 104 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR6079-201ENST00000635807 62 ntBASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.35□□□□□ -2.19
NEDD8-MDP1E9PL57 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR369-201ENST00000362155 70 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 SNORD1A-201ENST00000364968 72 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 Y_RNA.458-201ENST00000384240 102 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-1031P-201ENST00000384773 107 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU1-78P-201ENST00000391248 165 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU2-54P-201ENST00000410299 190 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 Y_RNA.604-201ENST00000410574 102 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 AC022028.1-201ENST00000412054 408 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 SDAD1P3-201ENST00000427380 333 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 AC245047.3-201ENST00000429428 127 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 SUMO1P2-201ENST00000452524 304 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 RPS26P55-201ENST00000471178 356 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 AC005176.2-201ENST00000596933 147 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 AC021506.2-201ENST00000612354 169 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 AC007485.1-201ENST00000616755 206 ntBASIC1.34□□□□□ -2.19
NEDD8-MDP1E9PL57 MTND4P29-201ENST00000503122 1372 ntBASIC1.34□□□□□ -2.2
NEDD8-MDP1E9PL57 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NEDD8-MDP1E9PL57 Y_RNA.39-201ENST00000362620 98 ntBASIC1.33□□□□□ -2.2
NEDD8-MDP1E9PL57 Y_RNA.269-201ENST00000364685 89 ntBASIC1.33□□□□□ -2.2
NEDD8-MDP1E9PL57 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.33□□□□□ -2.2
NEDD8-MDP1E9PL57 SNORA40.6-201ENST00000391153 128 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms