Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 MIR4658-201ENST00000584344 65 ntBASIC2.76□□□□□ -1.97
CCDC66A2RUB6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC66A2RUB6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC66A2RUB6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC66A2RUB6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC66A2RUB6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC66A2RUB6 RNU4-10P-201ENST00000364383 140 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 MIR9-1-201ENST00000385198 89 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 MIR1262-201ENST00000408276 93 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 SNORA11.2-201ENST00000408318 127 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 RNU2-2P-201ENST00000410396 191 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 AL135786.1-201ENST00000415892 214 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 HMGN2P34-201ENST00000437647 269 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 AC011753.1-201ENST00000451001 220 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 RNU1-131P-201ENST00000458943 161 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 UBE2DNL-203ENST00000474922 222 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC66A2RUB6 AC011406.1-201ENST00000512440 370 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 MRPS18CP4-201ENST00000535821 231 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 GTF3AP2-201ENST00000557014 266 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 MIR5688-201ENST00000580619 83 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC66A2RUB6 ELOCP29-201ENST00000588193 334 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 RNU2-4P-201ENST00000606190 192 ntBASIC2.75□□□□□ -1.97
CCDC66A2RUB6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC66A2RUB6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC66A2RUB6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC66A2RUB6 snoU2-30.2-201ENST00000362805 70 ntBASIC2.74□□□□□ -1.97
CCDC66A2RUB6 SNORA38-201ENST00000363946 132 ntBASIC2.74□□□□□ -1.97
CCDC66A2RUB6 RNU6-160P-201ENST00000384591 107 ntBASIC2.74□□□□□ -1.97
CCDC66A2RUB6 SNORA36B-201ENST00000410438 131 ntBASIC2.74□□□□□ -1.97
CCDC66A2RUB6 AL162725.1-201ENST00000435405 301 ntBASIC2.74□□□□□ -1.97
CCDC66A2RUB6 AL353689.1-201ENST00000438895 199 ntBASIC2.74□□□□□ -1.97
CCDC66A2RUB6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC66A2RUB6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC66A2RUB6 RNU7-172P-201ENST00000517125 64 ntBASIC2.74□□□□□ -1.97
CCDC66A2RUB6 AC015720.1-201ENST00000565251 277 ntBASIC2.74□□□□□ -1.97
CCDC66A2RUB6 AC127455.1-201ENST00000565496 145 ntBASIC2.74□□□□□ -1.97
CCDC66A2RUB6 MIR4724-201ENST00000579485 89 ntBASIC2.74□□□□□ -1.97
CCDC66A2RUB6 POLR3GP1-201ENST00000594073 261 ntBASIC2.74□□□□□ -1.97
CCDC66A2RUB6 U6.73-201ENST00000619194 103 ntBASIC2.74□□□□□ -1.97
CCDC66A2RUB6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC66A2RUB6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
CCDC66A2RUB6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CCDC66A2RUB6 MIR367-201ENST00000362299 68 ntBASIC2.73□□□□□ -1.97
CCDC66A2RUB6 Y_RNA.24-201ENST00000362508 103 ntBASIC2.73□□□□□ -1.97
CCDC66A2RUB6 RNU6-103P-201ENST00000363686 107 ntBASIC2.73□□□□□ -1.97
CCDC66A2RUB6 RNU4-13P-201ENST00000364019 141 ntBASIC2.73□□□□□ -1.97
CCDC66A2RUB6 RNU6-301P-201ENST00000384277 107 ntBASIC2.73□□□□□ -1.97
CCDC66A2RUB6 MIR548M-201ENST00000408260 86 ntBASIC2.73□□□□□ -1.97
CCDC66A2RUB6 RNA5SP511-201ENST00000410487 115 ntBASIC2.73□□□□□ -1.97
CCDC66A2RUB6 RN7SKP284-201ENST00000411002 343 ntBASIC2.73□□□□□ -1.97
CCDC66A2RUB6 RNA5SP356-201ENST00000515972 94 ntBASIC2.73□□□□□ -1.97
CCDC66A2RUB6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.73□□□□□ -1.97
CCDC66A2RUB6 AL353149.1-201ENST00000610667 244 ntBASIC2.73□□□□□ -1.97
CCDC66A2RUB6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC66A2RUB6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC66A2RUB6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC66A2RUB6 Y_RNA.182-201ENST00000363880 111 ntBASIC2.72□□□□□ -1.97
CCDC66A2RUB6 snoU2_19.4-201ENST00000364329 80 ntBASIC2.72□□□□□ -1.97
CCDC66A2RUB6 SNORD114-6-201ENST00000364393 72 ntBASIC2.72□□□□□ -1.97
CCDC66A2RUB6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC66A2RUB6 RNU6-969P-201ENST00000383900 105 ntBASIC2.72□□□□□ -1.97
CCDC66A2RUB6 AC105272.1-201ENST00000438604 198 ntBASIC2.72□□□□□ -1.97
CCDC66A2RUB6 AC245102.2-201ENST00000448956 180 ntBASIC2.72□□□□□ -1.97
CCDC66A2RUB6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC66A2RUB6 RNA5SP282-201ENST00000516355 108 ntBASIC2.72□□□□□ -1.97
CCDC66A2RUB6 AC079600.2-201ENST00000550076 130 ntBASIC2.72□□□□□ -1.97
CCDC66A2RUB6 AC026271.5-201ENST00000577873 130 ntBASIC2.72□□□□□ -1.97
CCDC66A2RUB6 MIR4513-201ENST00000581077 86 ntBASIC2.72□□□□□ -1.97
CCDC66A2RUB6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.72□□□□□ -1.97
CCDC66A2RUB6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CCDC66A2RUB6 MIRLET7G-201ENST00000362280 84 ntBASIC2.71□□□□□ -1.98
CCDC66A2RUB6 Y_RNA.75-201ENST00000362927 97 ntBASIC2.71□□□□□ -1.98
CCDC66A2RUB6 RNU6-417P-201ENST00000384712 107 ntBASIC2.71□□□□□ -1.98
CCDC66A2RUB6 RNU6-376P-201ENST00000384731 106 ntBASIC2.71□□□□□ -1.98
CCDC66A2RUB6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC66A2RUB6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC66A2RUB6 RPL23AP54-201ENST00000495129 419 ntBASIC2.71□□□□□ -1.98
CCDC66A2RUB6 RPS29P21-201ENST00000496272 170 ntBASIC2.71□□□□□ -1.98
CCDC66A2RUB6 RN7SL636P-201ENST00000497504 294 ntBASIC2.71□□□□□ -1.98
CCDC66A2RUB6 RNU6-1041P-201ENST00000516254 102 ntBASIC2.71□□□□□ -1.98
CCDC66A2RUB6 CYCSP26-201ENST00000534107 320 ntBASIC2.71□□□□□ -1.98
CCDC66A2RUB6 AC006023.1-201ENST00000603944 259 ntBASIC2.71□□□□□ -1.98
CCDC66A2RUB6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
CCDC66A2RUB6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC66A2RUB6 RNU1-96P-201ENST00000364163 162 ntBASIC2.7□□□□□ -1.98
CCDC66A2RUB6 Y_RNA.412-201ENST00000384001 104 ntBASIC2.7□□□□□ -1.98
CCDC66A2RUB6 SNORA72-201ENST00000384339 132 ntBASIC2.7□□□□□ -1.98
CCDC66A2RUB6 Y_RNA.572-201ENST00000384757 98 ntBASIC2.7□□□□□ -1.98
CCDC66A2RUB6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.7□□□□□ -1.98
CCDC66A2RUB6 MTND2P29-201ENST00000438595 412 ntBASIC2.7□□□□□ -1.98
CCDC66A2RUB6 Y_RNA.797-201ENST00000515977 94 ntBASIC2.7□□□□□ -1.98
CCDC66A2RUB6 RN7SKP132-201ENST00000516001 208 ntBASIC2.7□□□□□ -1.98
CCDC66A2RUB6 RNU6-255P-201ENST00000516957 105 ntBASIC2.7□□□□□ -1.98
CCDC66A2RUB6 MIR4744-201ENST00000581563 82 ntBASIC2.7□□□□□ -1.98
CCDC66A2RUB6 MIR6840-201ENST00000611937 71 ntBASIC2.7□□□□□ -1.98
CCDC66A2RUB6 AL391903.3-201ENST00000612158 163 ntBASIC2.7□□□□□ -1.98
CCDC66A2RUB6 MIR338-201ENST00000636369 67 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms