Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 AL590632.1-201ENST00000424289 371 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 AC073261.1-201ENST00000429409 121 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 TPTE2P5-203ENST00000458118 728 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 SNORD123-201ENST00000459473 70 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 AC018710.1-201ENST00000506509 158 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 AC112693.2-201ENST00000556538 232 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 AL355375.2-201ENST00000574825 175 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 AC090616.2-202ENST00000584248 222 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 AF250324.2-201ENST00000608299 610 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 AC006504.8-201ENST00000621046 635 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
TRAV3A0A0B4J244 RNU6-923P-201ENST00000364753 107 ntBASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 SNORD83.1-201ENST00000411362 77 ntBASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 AL139396.1-201ENST00000421137 167 ntBASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 RNU7-63P-201ENST00000459054 62 ntBASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 SNORA18.7-201ENST00000516910 131 ntBASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 RNA5SP94-201ENST00000516917 108 ntBASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 AC141557.1-201ENST00000540982 400 ntBASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 AC093027.1-201ENST00000546698 429 ntBASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 AL136370.1-201ENST00000608166 691 ntBASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 AC067863.3-201ENST00000624172 122 ntBASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 MIR4251-201ENST00000635819 61 ntBASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 AC106754.1-201ENST00000562632 1513 ntBASIC-0.14□□□□□ -2.43
TRAV3A0A0B4J244 MIR410-201ENST00000362222 80 ntBASIC-0.15□□□□□ -2.43
TRAV3A0A0B4J244 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.15□□□□□ -2.43
TRAV3A0A0B4J244 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.15□□□□□ -2.43
TRAV3A0A0B4J244 RNU6-214P-201ENST00000384130 107 ntBASIC-0.15□□□□□ -2.43
TRAV3A0A0B4J244 MIR516B2-201ENST00000385190 85 ntBASIC-0.15□□□□□ -2.43
TRAV3A0A0B4J244 AL590002.1-201ENST00000406554 418 ntBASIC-0.15□□□□□ -2.43
TRAV3A0A0B4J244 RNA5SP95-201ENST00000410319 137 ntBASIC-0.15□□□□□ -2.43
TRAV3A0A0B4J244 PDCL2P1-201ENST00000419302 352 ntBASIC-0.15□□□□□ -2.43
TRAV3A0A0B4J244 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.15□□□□□ -2.43
TRAV3A0A0B4J244 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.15□□□□□ -2.43
TRAV3A0A0B4J244 MIR4804-201ENST00000581683 73 ntBASIC-0.15□□□□□ -2.43
TRAV3A0A0B4J244 AC022306.3-201ENST00000619930 550 ntBASIC-0.15□□□□□ -2.43
TRAV3A0A0B4J244 AC127459.3-201ENST00000624328 466 ntBASIC-0.15□□□□□ -2.43
TRAV3A0A0B4J244 AP000720.1-201ENST00000625091 483 ntBASIC-0.15□□□□□ -2.43
TRAV3A0A0B4J244 RNU4-21P-201ENST00000362802 126 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 SNORD113-7-201ENST00000363762 77 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 MIR873-201ENST00000401120 77 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 AL606923.1-201ENST00000406616 190 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 AL606489.2-201ENST00000433886 234 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 RNU7-56P-201ENST00000458744 62 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 AC046134.1-201ENST00000514454 666 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 AL118558.2-201ENST00000556294 238 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 UBL5P4-201ENST00000562584 236 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 MIR3678-201ENST00000578455 94 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 AC008536.2-201ENST00000607284 349 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 AL357078.3-201ENST00000607528 618 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 AL591926.4-201ENST00000616895 298 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-0.16□□□□□ -2.44
TRAV3A0A0B4J244 FGF7P2-201ENST00000332473 296 ntBASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-407P-201ENST00000365280 104 ntBASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 RNU5A-2P-201ENST00000384337 116 ntBASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 SNORA8.2-201ENST00000384372 139 ntBASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-933P-201ENST00000384424 107 ntBASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 MTND1P26-201ENST00000440488 538 ntBASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 SUMO1P2-201ENST00000452524 304 ntBASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 RPL30P10-201ENST00000488148 337 ntBASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-977P-201ENST00000516411 103 ntBASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 MIR3913-1-201ENST00000577744 102 ntBASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 AC092747.3-201ENST00000603769 301 ntBASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 uc_338.16-201ENST00000621804 95 ntBASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.17□□□□□ -2.44
TRAV3A0A0B4J244 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 SNORD68-201ENST00000363214 84 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 SNORD45.3-201ENST00000363836 72 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-396P-201ENST00000365369 105 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-38P-201ENST00000384085 107 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-1103P-201ENST00000384150 107 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-700P-201ENST00000391043 107 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 RNA5SP496-201ENST00000391240 109 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 SNORA75.6-201ENST00000391318 127 ntBASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV3A0A0B4J244 AL353572.1-201ENST00000442490 417 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms