Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 MIR4802-201ENST00000581881 80 ntBASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 uc_338.4-201ENST00000616635 176 ntBASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 AL162726.3-218ENST00000636401 95 ntBASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 AC068137.4-201ENST00000638485 296 ntBASIC-0.74□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU6-873P-201ENST00000363833 107 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU4-84P-201ENST00000364200 139 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 AL137792.2-201ENST00000443484 235 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU7-62P-201ENST00000458856 62 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU7-185P-201ENST00000459215 60 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 SNORD45.4-201ENST00000516629 73 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU2-12P-201ENST00000517216 168 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 CR383656.4-201ENST00000546909 122 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 MTATP6P25-201ENST00000574491 261 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR3925-201ENST00000584674 77 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR4263-201ENST00000584745 83 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 AC006380.1-201ENST00000603598 186 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU6-85P-201ENST00000605989 107 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 AC016597.2-201ENST00000613256 341 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 AL442067.1-201ENST00000613261 223 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 AC104010.1-201ENST00000616889 150 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 uc_338.22-201ENST00000622722 187 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 AL391099.1-201ENST00000624635 187 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 MTND1P7-201ENST00000632801 297 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 U6.114-201ENST00000636407 96 ntBASIC-0.75□□□□□ -2.53
TRAV1-2A0A0B4J238 SNORA27.1-201ENST00000362604 124 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU4-73P-201ENST00000363164 141 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU6-169P-201ENST00000365336 107 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR570-201ENST00000384917 97 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 RN7SKP142-201ENST00000411236 328 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 AC092447.3-201ENST00000426027 686 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 MTND3P9-201ENST00000429526 346 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 AC114755.3-201ENST00000481111 251 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 SNORA25.14-201ENST00000516481 132 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 MTND4P33-201ENST00000556706 766 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR4775-201ENST00000581168 75 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 AC121247.2-201ENST00000604776 136 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 AC080013.3-201ENST00000606839 578 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 AL163152.1-201ENST00000642001 374 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 MTND4P12-201ENST00000498999 1377 ntBASIC-0.76□□□□□ -2.53
TRAV1-2A0A0B4J238 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR625-201ENST00000385047 85 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 MRPL42P2-201ENST00000403169 426 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR1912-201ENST00000410389 80 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 RPS27AP14-201ENST00000422868 454 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 USP9YP25-201ENST00000457708 443 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 RPL23AP75-201ENST00000491601 451 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 AC091959.1-201ENST00000495857 238 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 PRDX4P1-201ENST00000507189 574 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 AC074198.2-201ENST00000508153 258 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 AC091144.1-201ENST00000519573 138 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 MTND1P35-201ENST00000526739 508 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 MTND4LP18-201ENST00000526864 291 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR3941-201ENST00000582572 103 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 FAM157A-202ENST00000615155 405 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR6779-201ENST00000617283 64 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR6514-201ENST00000622549 70 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 AC127459.3-201ENST00000624328 466 ntBASIC-0.77□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR655-201ENST00000362159 97 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR148A-201ENST00000362215 68 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU6-727P-201ENST00000363592 107 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU6-533P-201ENST00000384144 107 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 SNORA51.10-201ENST00000384418 136 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 MIR522-201ENST00000385071 87 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 Y_RNA.608-201ENST00000410647 95 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 RNU4-63P-201ENST00000411313 118 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 RPL21P38-201ENST00000418090 167 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 AC109327.2-201ENST00000448339 378 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 AC018710.1-201ENST00000506509 158 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 AC046134.1-201ENST00000514454 666 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 AC090572.1-201ENST00000519251 160 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.78□□□□□ -2.53
TRAV1-2A0A0B4J238 AC010332.2-201ENST00000613083 1904 ntBASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 RNU6-407P-201ENST00000365280 104 ntBASIC-0.79□□□□□ -2.54
TRAV1-2A0A0B4J238 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms