Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 RPS15AP28-201ENST00000435088 386 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 AC011753.1-201ENST00000451001 220 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 RPS27P22-201ENST00000478056 241 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 AC104435.1-201ENST00000483483 166 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 RPL36AP21-201ENST00000490372 323 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 RNU6-111P-201ENST00000517179 105 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 RNU6-794P-201ENST00000517261 64 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 AC027419.1-201ENST00000522976 328 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 AC009127.3-201ENST00000570531 403 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 MIR5007-201ENST00000583098 95 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 MIR4282-201ENST00000583613 67 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 SNORD14A-201ENST00000606526 91 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 AC046143.2-201ENST00000609789 160 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.42□□□□□ -2.02
PCDHA3Q9Y5H8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 SNORD115-3-201ENST00000363100 82 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.122-201ENST00000363331 96 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 RNU6-801P-201ENST00000364087 105 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.341-201ENST00000365341 102 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 RNU6-662P-201ENST00000384253 104 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 Y_RNA.552-201ENST00000384665 112 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 RNU6-855P-201ENST00000410395 104 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 AL135790.2-201ENST00000437701 267 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 RNU6-1337P-201ENST00000516525 95 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 RNU6-388P-201ENST00000517012 105 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 RNU6-389P-201ENST00000517048 105 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 AC021269.2-201ENST00000532318 330 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 MIR4438-201ENST00000585271 93 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 AC005786.1-201ENST00000588553 154 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 MIR6766-201ENST00000622641 72 ntBASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHA3Q9Y5H8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
PCDHA3Q9Y5H8 RNU1-22P-201ENST00000363334 158 ntBASIC2.4□□□□□ -2.03
PCDHA3Q9Y5H8 RNY1-201ENST00000364228 113 ntBASIC2.4□□□□□ -2.03
PCDHA3Q9Y5H8 RNU6-117P-201ENST00000365415 107 ntBASIC2.4□□□□□ -2.03
PCDHA3Q9Y5H8 RNU6-1289P-201ENST00000384431 106 ntBASIC2.4□□□□□ -2.03
PCDHA3Q9Y5H8 RNU6-417P-201ENST00000384712 107 ntBASIC2.4□□□□□ -2.03
PCDHA3Q9Y5H8 MIR518A2-201ENST00000384966 87 ntBASIC2.4□□□□□ -2.03
PCDHA3Q9Y5H8 MIR524-201ENST00000385242 87 ntBASIC2.4□□□□□ -2.03
PCDHA3Q9Y5H8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.4□□□□□ -2.03
PCDHA3Q9Y5H8 OOSP1P1-201ENST00000423265 274 ntBASIC2.4□□□□□ -2.03
PCDHA3Q9Y5H8 BX510359.4-201ENST00000423750 193 ntBASIC2.4□□□□□ -2.03
PCDHA3Q9Y5H8 SNORD2.1-201ENST00000458762 69 ntBASIC2.4□□□□□ -2.03
PCDHA3Q9Y5H8 AC234781.5-201ENST00000508429 271 ntBASIC2.4□□□□□ -2.03
PCDHA3Q9Y5H8 RNU4-71P-201ENST00000516258 113 ntBASIC2.4□□□□□ -2.03
PCDHA3Q9Y5H8 MIR203B-201ENST00000636080 86 ntBASIC2.4□□□□□ -2.03
PCDHA3Q9Y5H8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 RNU6-1272P-201ENST00000362776 107 ntBASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 Y_RNA.257-201ENST00000364596 102 ntBASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 RNU6-338P-201ENST00000383888 105 ntBASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 MIR515-2-201ENST00000384883 83 ntBASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 MIR515-1-201ENST00000384884 83 ntBASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 RNA5SP465-201ENST00000391195 109 ntBASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 MIR1283-2-201ENST00000408621 87 ntBASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 RNA5SP270-201ENST00000411361 118 ntBASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 CST2P1-201ENST00000425770 87 ntBASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 AC108059.2-201ENST00000434626 151 ntBASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 RPS20P10-201ENST00000451209 253 ntBASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 AC097462.1-201ENST00000514125 324 ntBASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 MIR4435-1-201ENST00000582552 80 ntBASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 AP006437.1-201ENST00000641440 3685 ntBASIC2.39□□□□□ -2.03
PCDHA3Q9Y5H8 AC131280.1-202ENST00000624067 4211 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 MIRLET7G-201ENST00000362280 84 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 Y_RNA.65-201ENST00000362846 100 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 Y_RNA.117-201ENST00000363294 101 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 Y_RNA.172-201ENST00000363765 102 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 RNU6-1318P-201ENST00000365389 103 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 AL139109.1-201ENST00000455491 297 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 Y_RNA.637-201ENST00000459424 114 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 HMGB3P3-201ENST00000510526 400 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 RNU6-1278P-201ENST00000516130 107 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 RNU7-99P-201ENST00000516271 62 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 RNU7-172P-201ENST00000517125 64 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 IGLV3-17-201ENST00000519099 244 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 AC007229.1-201ENST00000590455 412 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 MIR6895-201ENST00000613497 78 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 AC078938.1-201ENST00000620993 318 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 AC022513.1-201ENST00000624512 117 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 snoU18.1-201ENST00000629629 71 ntBASIC2.38□□□□□ -2.03
PCDHA3Q9Y5H8 AL356292.1-201ENST00000283110 373 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 RNU4-82P-201ENST00000362443 140 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 Y_RNA.76-201ENST00000362931 109 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 SNORA3A-201ENST00000364113 130 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 Y_RNA.269-201ENST00000364685 89 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 SNORA72.4-201ENST00000384174 132 ntBASIC2.37□□□□□ -2.03
PCDHA3Q9Y5H8 MIR144-201ENST00000384886 86 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms