Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.04□□□□□ -2.24
TRAPPC4Q9Y296 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
TRAPPC4Q9Y296 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAPPC4Q9Y296 RNU6-454P-201ENST00000364292 107 ntBASIC1.03□□□□□ -2.24
TRAPPC4Q9Y296 Y_RNA.498-201ENST00000384460 102 ntBASIC1.03□□□□□ -2.24
TRAPPC4Q9Y296 RNU6-440P-201ENST00000390882 105 ntBASIC1.03□□□□□ -2.24
TRAPPC4Q9Y296 RAB28P5-201ENST00000427490 651 ntBASIC1.03□□□□□ -2.24
TRAPPC4Q9Y296 AL135790.2-201ENST00000437701 267 ntBASIC1.03□□□□□ -2.24
TRAPPC4Q9Y296 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAPPC4Q9Y296 MIR2053-201ENST00000459295 91 ntBASIC1.03□□□□□ -2.24
TRAPPC4Q9Y296 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.03□□□□□ -2.24
TRAPPC4Q9Y296 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.03□□□□□ -2.24
TRAPPC4Q9Y296 RNU6-120P-201ENST00000516077 103 ntBASIC1.03□□□□□ -2.24
TRAPPC4Q9Y296 AC027419.1-201ENST00000522976 328 ntBASIC1.03□□□□□ -2.24
TRAPPC4Q9Y296 AL078604.3-201ENST00000615580 211 ntBASIC1.03□□□□□ -2.24
TRAPPC4Q9Y296 U6.115-201ENST00000636045 103 ntBASIC1.03□□□□□ -2.24
TRAPPC4Q9Y296 MIR3674-201ENST00000636576 68 ntBASIC1.03□□□□□ -2.24
TRAPPC4Q9Y296 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
TRAPPC4Q9Y296 SNORA25.8-201ENST00000364831 128 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 Y_RNA.361-201ENST00000365515 120 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 RNU6-890P-201ENST00000384121 107 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 RNU6-1065P-201ENST00000384513 106 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 MIR625-201ENST00000385047 85 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 Y_RNA.592-201ENST00000410274 109 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 AC114482.1-201ENST00000418010 247 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 AC018865.2-201ENST00000423631 129 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 MTND4P28-201ENST00000426217 387 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 PGBD4P5-201ENST00000445958 426 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 SUMO1P2-201ENST00000452524 304 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 AC022493.2-201ENST00000506122 481 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 RNU6-277P-201ENST00000516272 106 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 RNU7-172P-201ENST00000517125 64 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 AC019176.1-201ENST00000518519 225 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 MIR3937-201ENST00000580135 106 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 AL359821.1-201ENST00000605519 182 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 AL365434.2-201ENST00000607979 234 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 AC040896.1-201ENST00000613819 479 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 MIR6079-201ENST00000635807 62 ntBASIC1.02□□□□□ -2.25
TRAPPC4Q9Y296 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 RNA5SP432-201ENST00000362480 116 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 SNORD114-7-201ENST00000362520 77 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 Y_RNA.243-201ENST00000364481 109 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 Y_RNA.327-201ENST00000365201 102 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 MIR618-201ENST00000385287 98 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 SNORA69.1-201ENST00000390904 137 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 AL034345.1-201ENST00000407768 123 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 RNU6-1156P-201ENST00000410365 100 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 SNORD12B-201ENST00000410433 91 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 RPL30P7-201ENST00000479312 323 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 RNA5SP20-201ENST00000515976 84 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 RNU6-559P-201ENST00000516151 98 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 AC091178.2-201ENST00000584401 117 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 AL162424.1-201ENST00000602325 221 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 AC025253.1-201ENST00000613623 543 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 AL513423.1-201ENST00000621695 132 ntBASIC1.01□□□□□ -2.25
TRAPPC4Q9Y296 RNU6-117P-201ENST00000365415 107 ntBASIC1□□□□□ -2.25
TRAPPC4Q9Y296 RNU11-5P-201ENST00000391216 129 ntBASIC1□□□□□ -2.25
TRAPPC4Q9Y296 MIR873-201ENST00000401120 77 ntBASIC1□□□□□ -2.25
TRAPPC4Q9Y296 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1□□□□□ -2.25
TRAPPC4Q9Y296 SNX2P2-201ENST00000424553 323 ntBASIC1□□□□□ -2.25
TRAPPC4Q9Y296 AL137792.2-201ENST00000443484 235 ntBASIC1□□□□□ -2.25
TRAPPC4Q9Y296 MTCO3P10-201ENST00000455912 772 ntBASIC1□□□□□ -2.25
TRAPPC4Q9Y296 ELOCP24-201ENST00000456370 334 ntBASIC1□□□□□ -2.25
TRAPPC4Q9Y296 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1□□□□□ -2.25
TRAPPC4Q9Y296 AC093852.1-201ENST00000503587 266 ntBASIC1□□□□□ -2.25
TRAPPC4Q9Y296 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1□□□□□ -2.25
TRAPPC4Q9Y296 RNU6-470P-201ENST00000515954 104 ntBASIC1□□□□□ -2.25
TRAPPC4Q9Y296 RNU7-4P-201ENST00000516961 62 ntBASIC1□□□□□ -2.25
TRAPPC4Q9Y296 RNU6-264P-201ENST00000517134 104 ntBASIC1□□□□□ -2.25
TRAPPC4Q9Y296 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1□□□□□ -2.25
TRAPPC4Q9Y296 RAB11AP2-201ENST00000545905 639 ntBASIC1□□□□□ -2.25
TRAPPC4Q9Y296 MIR3124-201ENST00000582636 67 ntBASIC1□□□□□ -2.25
TRAPPC4Q9Y296 UBE2V2P2-201ENST00000587677 504 ntBASIC1□□□□□ -2.25
TRAPPC4Q9Y296 AC073349.3-201ENST00000617616 186 ntBASIC1□□□□□ -2.25
TRAPPC4Q9Y296 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 Y_RNA.142-201ENST00000363491 102 ntBASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 RNU6-392P-201ENST00000364926 101 ntBASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 RNU6-407P-201ENST00000365280 104 ntBASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 RNA5SP259-201ENST00000365541 109 ntBASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 RNU6-1310P-201ENST00000384153 107 ntBASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 RNU6-1297P-201ENST00000384415 104 ntBASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 RNY3P4-201ENST00000384428 101 ntBASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 Y_RNA.653-201ENST00000459091 95 ntBASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 AC108729.3-201ENST00000513484 108 ntBASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 RNU6-341P-201ENST00000516973 96 ntBASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 SUMO2P16-201ENST00000519475 264 ntBASIC0.99□□□□□ -2.25
TRAPPC4Q9Y296 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms