Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC073544.1-201ENST00000600110 1595 ntBASIC2.59□□□□□ -1.99
SHROOM4Q9ULL8 Y_RNA.259-201ENST00000364619 101 ntBASIC2.58□□□□□ -2
SHROOM4Q9ULL8 RNU6-439P-201ENST00000384188 106 ntBASIC2.58□□□□□ -2
SHROOM4Q9ULL8 SNORA40.6-201ENST00000391153 128 ntBASIC2.58□□□□□ -2
SHROOM4Q9ULL8 AC091951.2-201ENST00000500762 203 ntBASIC2.58□□□□□ -2
SHROOM4Q9ULL8 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.58□□□□□ -2
SHROOM4Q9ULL8 SNORA77B-201ENST00000578179 125 ntBASIC2.58□□□□□ -2
SHROOM4Q9ULL8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SHROOM4Q9ULL8 RNU6-1264P-201ENST00000383891 107 ntBASIC2.58□□□□□ -2
SHROOM4Q9ULL8 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.58□□□□□ -2
SHROOM4Q9ULL8 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.58□□□□□ -2
SHROOM4Q9ULL8 MTND5P20-201ENST00000448677 143 ntBASIC2.58□□□□□ -2
SHROOM4Q9ULL8 HSPE1P24-201ENST00000450782 238 ntBASIC2.58□□□□□ -2
SHROOM4Q9ULL8 RPS29P1-201ENST00000465274 159 ntBASIC2.58□□□□□ -2
SHROOM4Q9ULL8 AC010469.2-201ENST00000496412 480 ntBASIC2.58□□□□□ -2
SHROOM4Q9ULL8 Y_RNA.675-201ENST00000516389 149 ntBASIC2.58□□□□□ -2
SHROOM4Q9ULL8 MIR4709-201ENST00000577272 72 ntBASIC2.58□□□□□ -2
SHROOM4Q9ULL8 FAM106DP-201ENST00000586416 501 ntBASIC2.58□□□□□ -2
SHROOM4Q9ULL8 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.58□□□□□ -2
SHROOM4Q9ULL8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.57□□□□□ -2
SHROOM4Q9ULL8 RNU6-490P-201ENST00000362985 107 ntBASIC2.57□□□□□ -2
SHROOM4Q9ULL8 MTCO2P27-201ENST00000420740 428 ntBASIC2.57□□□□□ -2
SHROOM4Q9ULL8 SNRPGP13-201ENST00000442212 177 ntBASIC2.57□□□□□ -2
SHROOM4Q9ULL8 RPS27P22-201ENST00000478056 241 ntBASIC2.57□□□□□ -2
SHROOM4Q9ULL8 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.57□□□□□ -2
SHROOM4Q9ULL8 RNU6-875P-201ENST00000516488 106 ntBASIC2.57□□□□□ -2
SHROOM4Q9ULL8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.57□□□□□ -2
SHROOM4Q9ULL8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.57□□□□□ -2
SHROOM4Q9ULL8 AC091895.1-201ENST00000624494 256 ntBASIC2.57□□□□□ -2
SHROOM4Q9ULL8 RNU6-1301P-201ENST00000362724 104 ntBASIC2.56□□□□□ -2
SHROOM4Q9ULL8 RNU6-890P-201ENST00000384121 107 ntBASIC2.56□□□□□ -2
SHROOM4Q9ULL8 MIR548J-201ENST00000408833 112 ntBASIC2.56□□□□□ -2
SHROOM4Q9ULL8 SNORD12B-201ENST00000410433 91 ntBASIC2.56□□□□□ -2
SHROOM4Q9ULL8 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.56□□□□□ -2
SHROOM4Q9ULL8 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.56□□□□□ -2
SHROOM4Q9ULL8 MTCO3P10-201ENST00000455912 772 ntBASIC2.56□□□□□ -2
SHROOM4Q9ULL8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.56□□□□□ -2
SHROOM4Q9ULL8 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.56□□□□□ -2
SHROOM4Q9ULL8 MIR4422-201ENST00000581938 83 ntBASIC2.56□□□□□ -2
SHROOM4Q9ULL8 MIR4438-201ENST00000585271 93 ntBASIC2.56□□□□□ -2
SHROOM4Q9ULL8 AL132765.2-201ENST00000610812 351 ntBASIC2.56□□□□□ -2
SHROOM4Q9ULL8 AC087588.2-201ENST00000617667 426 ntBASIC2.56□□□□□ -2
SHROOM4Q9ULL8 MTND5P10-201ENST00000603719 1809 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 MIR126-201ENST00000362291 85 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 RNA5SP361-201ENST00000362686 118 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 Y_RNA.67-201ENST00000362870 100 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 SNORA33-201ENST00000363664 130 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 RNU6-318P-201ENST00000384283 103 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 MIR520E-201ENST00000384867 87 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 RN7SKP200-201ENST00000410564 320 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 ELOCP24-201ENST00000456370 334 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 RNU6-625P-201ENST00000459412 107 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 COX6CP14-201ENST00000469580 174 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 RNU6-120P-201ENST00000516077 103 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 Y_RNA.718-201ENST00000517110 102 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 AC027419.1-201ENST00000522976 328 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.55□□□□□ -2
SHROOM4Q9ULL8 RPL21P9-201ENST00000556149 474 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 AC084781.2-201ENST00000615568 161 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 MTND4LP32-201ENST00000636111 270 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 U6.108-201ENST00000637764 58 ntBASIC2.55□□□□□ -2
SHROOM4Q9ULL8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SHROOM4Q9ULL8 MIR410-201ENST00000362222 80 ntBASIC2.54□□□□□ -2
SHROOM4Q9ULL8 RNU4-41P-201ENST00000364426 143 ntBASIC2.54□□□□□ -2
SHROOM4Q9ULL8 Y_RNA.314-201ENST00000365114 102 ntBASIC2.54□□□□□ -2
SHROOM4Q9ULL8 AC099799.1-201ENST00000439809 192 ntBASIC2.54□□□□□ -2
SHROOM4Q9ULL8 FGF7P4-201ENST00000509595 295 ntBASIC2.54□□□□□ -2
SHROOM4Q9ULL8 SNORA40.9-201ENST00000515895 93 ntBASIC2.54□□□□□ -2
SHROOM4Q9ULL8 RNU6-277P-201ENST00000516272 106 ntBASIC2.54□□□□□ -2
SHROOM4Q9ULL8 MIR548S-201ENST00000581352 82 ntBASIC2.54□□□□□ -2
SHROOM4Q9ULL8 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.54□□□□□ -2
SHROOM4Q9ULL8 MIR1302-1-201ENST00000637932 143 ntBASIC2.54□□□□□ -2
SHROOM4Q9ULL8 SNORD33-201ENST00000362761 85 ntBASIC2.53□□□□□ -2
SHROOM4Q9ULL8 RNU6-1009P-201ENST00000390996 107 ntBASIC2.53□□□□□ -2
SHROOM4Q9ULL8 Y_RNA.592-201ENST00000410274 109 ntBASIC2.53□□□□□ -2
SHROOM4Q9ULL8 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.53□□□□□ -2
SHROOM4Q9ULL8 RPS26P45-201ENST00000471748 340 ntBASIC2.53□□□□□ -2
SHROOM4Q9ULL8 AC023790.1-201ENST00000482174 347 ntBASIC2.53□□□□□ -2
SHROOM4Q9ULL8 AL357075.2-201ENST00000614906 189 ntBASIC2.53□□□□□ -2
SHROOM4Q9ULL8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.53□□□□□ -2
SHROOM4Q9ULL8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.53□□□□□ -2
SHROOM4Q9ULL8 MIR3674-201ENST00000636576 68 ntBASIC2.53□□□□□ -2
SHROOM4Q9ULL8 RNA5SP109-201ENST00000391010 116 ntBASIC2.52□□□□□ -2.01
SHROOM4Q9ULL8 AC236972.2-201ENST00000434979 310 ntBASIC2.52□□□□□ -2.01
SHROOM4Q9ULL8 RNU7-169P-201ENST00000459456 61 ntBASIC2.52□□□□□ -2.01
SHROOM4Q9ULL8 AC005908.1-201ENST00000468701 347 ntBASIC2.52□□□□□ -2.01
SHROOM4Q9ULL8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.51□□□□□ -2.01
SHROOM4Q9ULL8 Y_RNA.70-201ENST00000362886 110 ntBASIC2.51□□□□□ -2.01
SHROOM4Q9ULL8 Y_RNA.178-201ENST00000363832 102 ntBASIC2.51□□□□□ -2.01
SHROOM4Q9ULL8 Y_RNA.187-201ENST00000363918 113 ntBASIC2.51□□□□□ -2.01
SHROOM4Q9ULL8 Y_RNA.205-201ENST00000364128 113 ntBASIC2.51□□□□□ -2.01
SHROOM4Q9ULL8 SNORD1A-201ENST00000364968 72 ntBASIC2.51□□□□□ -2.01
SHROOM4Q9ULL8 SNORA20B-201ENST00000384220 132 ntBASIC2.51□□□□□ -2.01
SHROOM4Q9ULL8 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.51□□□□□ -2.01
SHROOM4Q9ULL8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.51□□□□□ -2.01
SHROOM4Q9ULL8 AC023157.2-201ENST00000540596 141 ntBASIC2.51□□□□□ -2.01
SHROOM4Q9ULL8 Y_RNA.146-201ENST00000363549 102 ntBASIC2.5□□□□□ -2.01
SHROOM4Q9ULL8 RNU6-271P-201ENST00000363858 105 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms