Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 Y_RNA.279-201ENST00000364763 95 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 RNU6-281P-201ENST00000384212 103 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 SNORD41-201ENST00000386967 70 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 RNU11-5P-201ENST00000391216 129 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 RNU1-139P-201ENST00000391307 165 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 AC009161.1-201ENST00000417306 376 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 MTND3P23-201ENST00000431980 347 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.92□□□□□ -2.26
CDH9Q9ULB4 AC097462.1-201ENST00000514125 324 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.683-201ENST00000516508 93 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 RNU6-107P-201ENST00000516643 102 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 RN7SKP49-201ENST00000516675 260 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 AC090049.2-201ENST00000550377 109 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 MIR4790-201ENST00000577799 79 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 MIR4273-201ENST00000582824 84 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 AC098679.4-201ENST00000624241 654 ntBASIC0.92□□□□□ -2.26
CDH9Q9ULB4 RNU6-222P-201ENST00000362438 107 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.404-201ENST00000383978 102 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 RNU6-424P-201ENST00000384367 105 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.594-201ENST00000410373 140 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 RNU4-14P-201ENST00000410858 122 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 MTCO3P19-201ENST00000415864 321 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 PDCL2P1-201ENST00000419302 352 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 USMG5P1-201ENST00000425964 177 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 RPS3AP52-201ENST00000435639 297 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 AC245047.7-201ENST00000440265 293 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 MTND4LP16-201ENST00000440828 295 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.91□□□□□ -2.26
CDH9Q9ULB4 U8.22-201ENST00000459141 133 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 RPS29P1-201ENST00000465274 159 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 RNA5SP168-201ENST00000516642 112 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 MTND4LP26-201ENST00000518144 282 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 AC105029.1-201ENST00000520250 669 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 MIR4698-201ENST00000577795 80 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 AC125232.2-201ENST00000592457 143 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 FAM71BP1-201ENST00000604431 523 ntBASIC0.91□□□□□ -2.26
CDH9Q9ULB4 Y_RNA.88-201ENST00000363029 99 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 Y_RNA.106-201ENST00000363189 100 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 Y_RNA.265-201ENST00000364677 108 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 RNU6-1013P-201ENST00000384180 107 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 Y_RNA.490-201ENST00000384413 102 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 SNORD12-201ENST00000391002 90 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 AL451046.2-201ENST00000403074 277 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 MIR548F5-201ENST00000408421 86 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 AC063976.4-201ENST00000421971 163 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 EIF1P2-201ENST00000428233 350 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 AC018710.1-201ENST00000506509 158 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 RNU6-1114P-201ENST00000516022 107 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 RNU7-172P-201ENST00000517125 64 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.9□□□□□ -2.27
CDH9Q9ULB4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.9□□□□□ -2.27
CDH9Q9ULB4 MIR4661-201ENST00000582720 75 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 AL357075.2-201ENST00000614906 189 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.9□□□□□ -2.27
CDH9Q9ULB4 Y_RNA.116-201ENST00000363292 103 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 Y_RNA.248-201ENST00000364501 109 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 MIR329-1-201ENST00000385028 80 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 RNU6-510P-201ENST00000391239 108 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.89□□□□□ -2.27
CDH9Q9ULB4 Y_RNA.619-201ENST00000410951 90 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 ELOCP21-201ENST00000412558 336 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 CALM2P4-201ENST00000430810 426 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.89□□□□□ -2.27
CDH9Q9ULB4 MTND3P10-201ENST00000450967 341 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 RNU6-322P-201ENST00000516010 103 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 SNORD79.1-201ENST00000516069 84 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 RNU6-917P-201ENST00000516294 104 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 Y_RNA.691-201ENST00000516611 103 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 RNU6-1016P-201ENST00000516689 94 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 RNU7-28P-201ENST00000516759 62 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 AP002001.1-203ENST00000534002 267 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 RPL21P9-201ENST00000556149 474 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 AL020996.3-201ENST00000606617 222 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 AC092794.1-201ENST00000612734 582 ntBASIC0.89□□□□□ -2.27
CDH9Q9ULB4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.89□□□□□ -2.27
CDH9Q9ULB4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CDH9Q9ULB4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
CDH9Q9ULB4 Y_RNA.72-201ENST00000362894 103 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 SNORA2.2-201ENST00000365473 135 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 MIR562-201ENST00000384894 95 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 U8.16-201ENST00000391279 133 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 AL355796.1-201ENST00000406706 323 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 RNU6-1050P-201ENST00000410388 107 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 POLR2J4-204ENST00000418424 324 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 RBMX2P4-201ENST00000441256 376 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.88□□□□□ -2.27
CDH9Q9ULB4 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 RPL7P42-201ENST00000481005 679 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 OR9P1P-201ENST00000496431 281 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 AC116353.2-201ENST00000505332 712 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 RNU6-947P-201ENST00000516264 106 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 RNU2-56P-201ENST00000516826 190 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 RNU1-54P-201ENST00000517181 120 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.88□□□□□ -2.27
CDH9Q9ULB4 AL357312.1-201ENST00000603879 298 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 AC009229.3-201ENST00000608056 282 ntBASIC0.88□□□□□ -2.27
CDH9Q9ULB4 MTND5P16-201ENST00000460269 1703 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms