Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNU6-1205P-201ENST00000363625 106 ntBASIC3.12□□□□□ -1.91
DDX41Q9UJV9 RNU6-144P-201ENST00000383951 107 ntBASIC3.12□□□□□ -1.91
DDX41Q9UJV9 MIR512-1-201ENST00000384913 84 ntBASIC3.12□□□□□ -1.91
DDX41Q9UJV9 MIR29C-201ENST00000385231 88 ntBASIC3.12□□□□□ -1.91
DDX41Q9UJV9 AC104332.1-201ENST00000440471 797 ntBASIC3.12□□□□□ -1.91
DDX41Q9UJV9 RNU7-172P-201ENST00000517125 64 ntBASIC3.12□□□□□ -1.91
DDX41Q9UJV9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.12□□□□□ -1.91
DDX41Q9UJV9 MIR3945-201ENST00000581853 98 ntBASIC3.12□□□□□ -1.91
DDX41Q9UJV9 AC072026.1-201ENST00000605023 201 ntBASIC3.12□□□□□ -1.91
DDX41Q9UJV9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.12□□□□□ -1.91
DDX41Q9UJV9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX41Q9UJV9 snoU2-30.2-201ENST00000362805 70 ntBASIC3.11□□□□□ -1.91
DDX41Q9UJV9 RNU6-1048P-201ENST00000364054 107 ntBASIC3.11□□□□□ -1.91
DDX41Q9UJV9 RNU6-209P-201ENST00000384118 107 ntBASIC3.11□□□□□ -1.91
DDX41Q9UJV9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX41Q9UJV9 RNU6-1041P-201ENST00000516254 102 ntBASIC3.11□□□□□ -1.91
DDX41Q9UJV9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX41Q9UJV9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
DDX41Q9UJV9 RNU6-923P-201ENST00000364753 107 ntBASIC3.1□□□□□ -1.91
DDX41Q9UJV9 RNU6-1323P-201ENST00000384025 107 ntBASIC3.1□□□□□ -1.91
DDX41Q9UJV9 SNORA8.3-201ENST00000384679 139 ntBASIC3.1□□□□□ -1.91
DDX41Q9UJV9 RNU6-376P-201ENST00000384731 106 ntBASIC3.1□□□□□ -1.91
DDX41Q9UJV9 MIR196B-201ENST00000384852 84 ntBASIC3.1□□□□□ -1.91
DDX41Q9UJV9 RPS15AP28-201ENST00000435088 386 ntBASIC3.1□□□□□ -1.91
DDX41Q9UJV9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX41Q9UJV9 ATP5J2P3-201ENST00000451550 258 ntBASIC3.1□□□□□ -1.91
DDX41Q9UJV9 RNU7-120P-201ENST00000459334 63 ntBASIC3.1□□□□□ -1.91
DDX41Q9UJV9 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.1□□□□□ -1.91
DDX41Q9UJV9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX41Q9UJV9 AC097462.1-201ENST00000514125 324 ntBASIC3.1□□□□□ -1.91
DDX41Q9UJV9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX41Q9UJV9 MIR4435-1-201ENST00000582552 80 ntBASIC3.1□□□□□ -1.91
DDX41Q9UJV9 MIR548AY-201ENST00000617669 107 ntBASIC3.1□□□□□ -1.91
DDX41Q9UJV9 U6.73-201ENST00000619194 103 ntBASIC3.1□□□□□ -1.91
DDX41Q9UJV9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
DDX41Q9UJV9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.1□□□□□ -1.91
DDX41Q9UJV9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
DDX41Q9UJV9 RNU4-82P-201ENST00000362443 140 ntBASIC3.09□□□□□ -1.91
DDX41Q9UJV9 RNU6-859P-201ENST00000362728 107 ntBASIC3.09□□□□□ -1.91
DDX41Q9UJV9 RNU1-22P-201ENST00000363334 158 ntBASIC3.09□□□□□ -1.91
DDX41Q9UJV9 RNU6-417P-201ENST00000384712 107 ntBASIC3.09□□□□□ -1.91
DDX41Q9UJV9 RNU6-493P-201ENST00000391321 108 ntBASIC3.09□□□□□ -1.91
DDX41Q9UJV9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.09□□□□□ -1.91
DDX41Q9UJV9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
DDX41Q9UJV9 AC007229.1-201ENST00000590455 412 ntBASIC3.09□□□□□ -1.91
DDX41Q9UJV9 POLR3GP1-201ENST00000594073 261 ntBASIC3.09□□□□□ -1.91
DDX41Q9UJV9 AP003357.1-201ENST00000604497 148 ntBASIC3.09□□□□□ -1.91
DDX41Q9UJV9 AC004832.4-201ENST00000608952 331 ntBASIC3.09□□□□□ -1.91
DDX41Q9UJV9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.91
DDX41Q9UJV9 Y_RNA.802-201ENST00000614892 130 ntBASIC3.09□□□□□ -1.91
DDX41Q9UJV9 FTX_2.1-201ENST00000618816 94 ntBASIC3.09□□□□□ -1.91
DDX41Q9UJV9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
DDX41Q9UJV9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
DDX41Q9UJV9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.09□□□□□ -1.92
DDX41Q9UJV9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
DDX41Q9UJV9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
DDX41Q9UJV9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
DDX41Q9UJV9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
DDX41Q9UJV9 RNU6-653P-201ENST00000363074 106 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 SNORD115-3-201ENST00000363100 82 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 RNU6-23P-201ENST00000363283 107 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 Y_RNA.172-201ENST00000363765 102 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 SNORD114-6-201ENST00000364393 72 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 U8.7-201ENST00000364940 136 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 SNORD116-13-201ENST00000384408 92 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 Y_RNA.555-201ENST00000384673 110 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 MIR515-2-201ENST00000384883 83 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 MIR515-1-201ENST00000384884 83 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 AC117454.1-201ENST00000491120 168 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.08□□□□□ -1.92
DDX41Q9UJV9 HMGB3P3-201ENST00000510526 400 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.08□□□□□ -1.92
DDX41Q9UJV9 RNY3P16-201ENST00000516338 101 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 RNU7-115P-201ENST00000516433 55 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 RNU6-63P-201ENST00000516690 95 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 ZNF861P-201ENST00000588126 639 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 AL353149.1-201ENST00000610667 244 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 AL359075.3-201ENST00000613288 217 ntBASIC3.08□□□□□ -1.92
DDX41Q9UJV9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
DDX41Q9UJV9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
DDX41Q9UJV9 RNU4-17P-201ENST00000365598 141 ntBASIC3.07□□□□□ -1.92
DDX41Q9UJV9 RNU1-148P-201ENST00000384472 162 ntBASIC3.07□□□□□ -1.92
DDX41Q9UJV9 RNU6-1186P-201ENST00000410429 97 ntBASIC3.07□□□□□ -1.92
DDX41Q9UJV9 RNA5SP511-201ENST00000410487 115 ntBASIC3.07□□□□□ -1.92
DDX41Q9UJV9 AL135786.1-201ENST00000415892 214 ntBASIC3.07□□□□□ -1.92
DDX41Q9UJV9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.07□□□□□ -1.92
DDX41Q9UJV9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.07□□□□□ -1.92
DDX41Q9UJV9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.07□□□□□ -1.92
DDX41Q9UJV9 AC003982.1-202ENST00000469928 248 ntBASIC3.07□□□□□ -1.92
DDX41Q9UJV9 AC107393.1-201ENST00000512403 346 ntBASIC3.07□□□□□ -1.92
DDX41Q9UJV9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.07□□□□□ -1.92
DDX41Q9UJV9 MIR5688-201ENST00000580619 83 ntBASIC3.07□□□□□ -1.92
DDX41Q9UJV9 AC104984.5-201ENST00000586878 94 ntBASIC3.07□□□□□ -1.92
DDX41Q9UJV9 AL031274.2-201ENST00000599419 203 ntBASIC3.07□□□□□ -1.92
DDX41Q9UJV9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
DDX41Q9UJV9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
DDX41Q9UJV9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
DDX41Q9UJV9 MIR367-201ENST00000362299 68 ntBASIC3.06□□□□□ -1.92
DDX41Q9UJV9 RNA5SP493-201ENST00000364115 91 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms