Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 MIR562-201ENST00000384894 95 ntBASIC1.32□□□□□ -2.2
NPC1L1Q9UHC9 RNA5SP109-201ENST00000391010 116 ntBASIC1.32□□□□□ -2.2
NPC1L1Q9UHC9 MRPL42P3-201ENST00000401492 326 ntBASIC1.32□□□□□ -2.2
NPC1L1Q9UHC9 MRPL35P1-201ENST00000404272 572 ntBASIC1.32□□□□□ -2.2
NPC1L1Q9UHC9 PGBD4P5-201ENST00000445958 426 ntBASIC1.32□□□□□ -2.2
NPC1L1Q9UHC9 MIR2355-201ENST00000517199 87 ntBASIC1.32□□□□□ -2.2
NPC1L1Q9UHC9 AC091144.1-201ENST00000519573 138 ntBASIC1.32□□□□□ -2.2
NPC1L1Q9UHC9 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.32□□□□□ -2.2
NPC1L1Q9UHC9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.32□□□□□ -2.2
NPC1L1Q9UHC9 MIR4438-201ENST00000585271 93 ntBASIC1.32□□□□□ -2.2
NPC1L1Q9UHC9 AC095038.3-201ENST00000634439 195 ntBASIC1.32□□□□□ -2.2
NPC1L1Q9UHC9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.32□□□□□ -2.2
NPC1L1Q9UHC9 U6.108-201ENST00000637764 58 ntBASIC1.32□□□□□ -2.2
NPC1L1Q9UHC9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 Y_RNA.166-201ENST00000363730 102 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 MRPL35P3-201ENST00000421557 364 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 SNX2P2-201ENST00000424553 323 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 AC010154.1-201ENST00000425857 269 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 AC245047.3-201ENST00000429428 127 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 RPS27P1-201ENST00000450552 247 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 SNORD65B-201ENST00000459126 73 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 RPS27P22-201ENST00000478056 241 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 RPL17P19-201ENST00000489069 552 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 AC084782.3-201ENST00000612282 578 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 AC040896.1-201ENST00000613819 479 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 AC104260.1-201ENST00000616660 539 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 AC092794.2-201ENST00000620933 563 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 CASC19-280ENST00000642102 1351 ntBASIC1.31□□□□□ -2.2
NPC1L1Q9UHC9 RNU6-845P-201ENST00000362578 103 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 Y_RNA.88-201ENST00000363029 99 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 RNU6-879P-201ENST00000364328 108 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 SNORA25.8-201ENST00000364831 128 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 Y_RNA.393-201ENST00000383936 102 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 RNU6-1031P-201ENST00000384773 107 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 MIR329-1-201ENST00000385028 80 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 AL034345.1-201ENST00000407768 123 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 RNU6-1001P-201ENST00000411265 100 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 MTCO3P19-201ENST00000415864 321 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 AL353997.1-201ENST00000432936 108 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 MRPS10P1-201ENST00000448483 130 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 MTND3P10-201ENST00000450967 341 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 PCNPP5-201ENST00000452246 481 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 RAB11AP2-201ENST00000545905 639 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 AL442163.3-201ENST00000554110 156 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 RPL21P9-201ENST00000556149 474 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 AL929325.1-201ENST00000603096 117 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 AC211469.2-201ENST00000605461 205 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 AL078604.3-201ENST00000615580 211 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 MIR8054-201ENST00000620877 86 ntBASIC1.3□□□□□ -2.2
NPC1L1Q9UHC9 Y_RNA.160-201ENST00000363677 92 ntBASIC1.29□□□□□ -2.2
NPC1L1Q9UHC9 RNU6-1145P-201ENST00000384246 107 ntBASIC1.29□□□□□ -2.2
NPC1L1Q9UHC9 Y_RNA.505-201ENST00000384489 102 ntBASIC1.29□□□□□ -2.2
NPC1L1Q9UHC9 SNORA75.4-201ENST00000391278 119 ntBASIC1.29□□□□□ -2.2
NPC1L1Q9UHC9 Y_RNA.619-201ENST00000410951 90 ntBASIC1.29□□□□□ -2.2
NPC1L1Q9UHC9 SUMO1P2-201ENST00000452524 304 ntBASIC1.29□□□□□ -2.2
NPC1L1Q9UHC9 Y_RNA.635-201ENST00000459041 101 ntBASIC1.29□□□□□ -2.2
NPC1L1Q9UHC9 FRG2DP-202ENST00000566967 323 ntBASIC1.29□□□□□ -2.2
NPC1L1Q9UHC9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.29□□□□□ -2.2
NPC1L1Q9UHC9 AC022217.4-201ENST00000604389 163 ntBASIC1.29□□□□□ -2.2
NPC1L1Q9UHC9 SNORA28-201ENST00000606769 126 ntBASIC1.29□□□□□ -2.2
NPC1L1Q9UHC9 Y_RNA.279-201ENST00000364763 95 ntBASIC1.28□□□□□ -2.2
NPC1L1Q9UHC9 Y_RNA.498-201ENST00000384460 102 ntBASIC1.28□□□□□ -2.2
NPC1L1Q9UHC9 Y_RNA.557-201ENST00000384680 107 ntBASIC1.28□□□□□ -2.2
NPC1L1Q9UHC9 AC092423.1-201ENST00000430165 186 ntBASIC1.28□□□□□ -2.2
NPC1L1Q9UHC9 RPL7P42-201ENST00000481005 679 ntBASIC1.28□□□□□ -2.2
NPC1L1Q9UHC9 AC010469.2-201ENST00000496412 480 ntBASIC1.28□□□□□ -2.2
NPC1L1Q9UHC9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.28□□□□□ -2.2
NPC1L1Q9UHC9 AC125232.2-201ENST00000592457 143 ntBASIC1.28□□□□□ -2.2
NPC1L1Q9UHC9 AC122108.2-201ENST00000611946 526 ntBASIC1.28□□□□□ -2.2
NPC1L1Q9UHC9 AC021506.2-201ENST00000612354 169 ntBASIC1.28□□□□□ -2.2
NPC1L1Q9UHC9 AC018630.2-201ENST00000534866 2403 ntBASIC1.28□□□□□ -2.2
NPC1L1Q9UHC9 AC073544.1-201ENST00000600110 1595 ntBASIC1.28□□□□□ -2.21
NPC1L1Q9UHC9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 RNA5SP259-201ENST00000365541 109 ntBASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 RNU6-1310P-201ENST00000384153 107 ntBASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 Y_RNA.473-201ENST00000384333 102 ntBASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 RNU6-1105P-201ENST00000384774 107 ntBASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 RNU6-440P-201ENST00000390882 105 ntBASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 RNU6-876P-201ENST00000391295 104 ntBASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 RPS27P16-201ENST00000425758 201 ntBASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 AC005002.2-201ENST00000438228 269 ntBASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 Y_RNA.691-201ENST00000516611 103 ntBASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 RNU6-264P-201ENST00000517134 104 ntBASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 RNU7-128P-201ENST00000517247 62 ntBASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 AC005730.3-201ENST00000583067 366 ntBASIC1.27□□□□□ -2.21
NPC1L1Q9UHC9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 MIR410-201ENST00000362222 80 ntBASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 Y_RNA.248-201ENST00000364501 109 ntBASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 RNA5SP475-201ENST00000410568 110 ntBASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 MTND1P2-201ENST00000430604 821 ntBASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.26□□□□□ -2.21
NPC1L1Q9UHC9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms