Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SNORA31.24-201ENST00000517232 57 ntBASIC1.75□□□□□ -2.13
CLIP2Q9UDT6 AC011373.1-201ENST00000607270 237 ntBASIC1.75□□□□□ -2.13
CLIP2Q9UDT6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.75□□□□□ -2.13
CLIP2Q9UDT6 AL590240.4-201ENST00000616908 390 ntBASIC1.75□□□□□ -2.13
CLIP2Q9UDT6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 Y_RNA.84-201ENST00000363011 104 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 Y_RNA.257-201ENST00000364596 102 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 Y_RNA.288-201ENST00000364854 92 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 Y_RNA.350-201ENST00000365409 98 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 RNU6-926P-201ENST00000384075 107 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 RNU6-378P-201ENST00000384324 107 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 MIR30A-201ENST00000385092 71 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 AC007098.1-201ENST00000420122 367 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 AC012306.1-201ENST00000423267 114 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 AL354695.1-201ENST00000427935 228 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 RPL23AP75-201ENST00000491601 451 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 AC025465.3-201ENST00000510570 311 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 RNU6-1053P-201ENST00000515930 101 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 AL590705.4-201ENST00000532209 134 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 UBL5P4-201ENST00000562584 236 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 AC005786.1-201ENST00000588553 154 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 AL390123.1-201ENST00000603216 237 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 AC009541.1-201ENST00000438279 2662 ntBASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLIP2Q9UDT6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 MIR340-201ENST00000362125 95 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 RNU1-76P-201ENST00000362903 159 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 Y_RNA.143-201ENST00000363520 106 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 Y_RNA.237-201ENST00000364439 102 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 Y_RNA.276-201ENST00000364732 109 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 Y_RNA.286-201ENST00000364813 102 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 Y_RNA.541-201ENST00000384640 113 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 Y_RNA.562-201ENST00000384695 113 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 RNU6-713P-201ENST00000384761 107 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 RNU6-700P-201ENST00000391043 107 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 RNU6-1203P-201ENST00000410703 110 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 RN7SKP51-201ENST00000410781 304 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 Z98949.2-201ENST00000440996 144 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 snoU13.6-201ENST00000458785 104 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 AC023790.1-201ENST00000482174 347 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 ATP5EP1-201ENST00000510257 156 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 AC067942.3-201ENST00000512025 362 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 RNU6-966P-201ENST00000516479 104 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 RNU6-111P-201ENST00000517179 105 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 MIR4643-201ENST00000577473 78 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 MIR4300-201ENST00000581016 96 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 WWP1P1-201ENST00000466609 2769 ntBASIC1.73□□□□□ -2.13
CLIP2Q9UDT6 RNU6-1301P-201ENST00000362724 104 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 SNORD27-201ENST00000363981 72 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 RNU4-50P-201ENST00000364361 141 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 SNORD31B-201ENST00000364977 69 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 SNORA29-201ENST00000384183 140 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 RNU6-937P-201ENST00000384325 106 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 Y_RNA.518-201ENST00000384552 113 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 MIR32-201ENST00000384965 70 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 MIR628-201ENST00000385229 95 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 RNU6-1093P-201ENST00000391194 107 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 MIR1302-6-201ENST00000408466 90 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 RNA5SP100-201ENST00000410903 110 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 RNA5SP59-201ENST00000410922 110 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 AP000870.1-201ENST00000472927 406 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 TRBVB-201ENST00000477100 408 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 RNVU1-2-201ENST00000516326 135 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 SNORA40.15-201ENST00000516884 107 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 AC022868.1-201ENST00000517767 391 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 AC144568.1-201ENST00000520139 137 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 DEFB108E-201ENST00000524692 240 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 AL442163.3-201ENST00000554110 156 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 ZNF209P-201ENST00000593450 2304 ntBASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.72□□□□□ -2.13
CLIP2Q9UDT6 Y_RNA.27-201ENST00000362540 103 ntBASIC1.71□□□□□ -2.14
CLIP2Q9UDT6 Y_RNA.183-201ENST00000363882 113 ntBASIC1.71□□□□□ -2.14
CLIP2Q9UDT6 RNU6-338P-201ENST00000383888 105 ntBASIC1.71□□□□□ -2.14
CLIP2Q9UDT6 RNU6-968P-201ENST00000384076 107 ntBASIC1.71□□□□□ -2.14
CLIP2Q9UDT6 Y_RNA.556-201ENST00000384677 113 ntBASIC1.71□□□□□ -2.14
CLIP2Q9UDT6 SDAD1P3-201ENST00000427380 333 ntBASIC1.71□□□□□ -2.14
CLIP2Q9UDT6 SUMO1P3-201ENST00000439961 304 ntBASIC1.71□□□□□ -2.14
CLIP2Q9UDT6 AC087477.1-201ENST00000465747 340 ntBASIC1.71□□□□□ -2.14
CLIP2Q9UDT6 RNU6-1098P-201ENST00000516772 96 ntBASIC1.71□□□□□ -2.14
CLIP2Q9UDT6 RNU1-92P-201ENST00000517017 135 ntBASIC1.71□□□□□ -2.14
CLIP2Q9UDT6 SUB1P4-201ENST00000566062 339 ntBASIC1.71□□□□□ -2.14
CLIP2Q9UDT6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.71□□□□□ -2.14
CLIP2Q9UDT6 AC055872.1-201ENST00000570978 278 ntBASIC1.71□□□□□ -2.14
CLIP2Q9UDT6 RPS29P30-201ENST00000600975 111 ntBASIC1.71□□□□□ -2.14
CLIP2Q9UDT6 AL357075.2-201ENST00000614906 189 ntBASIC1.71□□□□□ -2.14
CLIP2Q9UDT6 AC240442.1-201ENST00000616055 283 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms