Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 RNU6-189P-201ENST00000516120 101 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 RNU6-445P-201ENST00000516949 107 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 AL157687.1-201ENST00000554853 619 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 AL158209.2-201ENST00000619266 216 ntBASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.23□□□□□ -2.45
VPS29Q9UBQ0 SNORA27.1-201ENST00000362604 124 ntBASIC-0.24□□□□□ -2.45
VPS29Q9UBQ0 U8.5-201ENST00000364528 136 ntBASIC-0.24□□□□□ -2.45
VPS29Q9UBQ0 AL590002.1-201ENST00000406554 418 ntBASIC-0.24□□□□□ -2.45
VPS29Q9UBQ0 Z99497.1-201ENST00000421282 135 ntBASIC-0.24□□□□□ -2.45
VPS29Q9UBQ0 MTCYBP8-201ENST00000422855 651 ntBASIC-0.24□□□□□ -2.45
VPS29Q9UBQ0 Z82188.1-201ENST00000436709 154 ntBASIC-0.24□□□□□ -2.45
VPS29Q9UBQ0 AL359672.1-201ENST00000442302 409 ntBASIC-0.24□□□□□ -2.45
VPS29Q9UBQ0 AL137792.2-201ENST00000443484 235 ntBASIC-0.24□□□□□ -2.45
VPS29Q9UBQ0 SNORD123-201ENST00000459473 70 ntBASIC-0.24□□□□□ -2.45
VPS29Q9UBQ0 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC-0.24□□□□□ -2.45
VPS29Q9UBQ0 AC093303.1-201ENST00000514549 295 ntBASIC-0.24□□□□□ -2.45
VPS29Q9UBQ0 RNU6-311P-201ENST00000516224 102 ntBASIC-0.24□□□□□ -2.45
VPS29Q9UBQ0 SNORA18.6-201ENST00000516792 115 ntBASIC-0.24□□□□□ -2.45
VPS29Q9UBQ0 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.24□□□□□ -2.45
VPS29Q9UBQ0 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.24□□□□□ -2.45
VPS29Q9UBQ0 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.25□□□□□ -2.45
VPS29Q9UBQ0 SNORA8.2-201ENST00000384372 139 ntBASIC-0.25□□□□□ -2.45
VPS29Q9UBQ0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.25□□□□□ -2.45
VPS29Q9UBQ0 BX295541.1-201ENST00000417774 250 ntBASIC-0.25□□□□□ -2.45
VPS29Q9UBQ0 AL590632.1-201ENST00000424289 371 ntBASIC-0.25□□□□□ -2.45
VPS29Q9UBQ0 AL353997.1-201ENST00000432936 108 ntBASIC-0.25□□□□□ -2.45
VPS29Q9UBQ0 RPL23AP91-201ENST00000569211 455 ntBASIC-0.25□□□□□ -2.45
VPS29Q9UBQ0 MIR3684-201ENST00000579779 74 ntBASIC-0.25□□□□□ -2.45
VPS29Q9UBQ0 AC087683.1-201ENST00000591187 441 ntBASIC-0.25□□□□□ -2.45
VPS29Q9UBQ0 AL357078.3-201ENST00000607528 618 ntBASIC-0.25□□□□□ -2.45
VPS29Q9UBQ0 MIR8087-201ENST00000612745 78 ntBASIC-0.25□□□□□ -2.45
VPS29Q9UBQ0 AC006504.8-201ENST00000621046 635 ntBASIC-0.25□□□□□ -2.45
VPS29Q9UBQ0 SNORD50.1-201ENST00000362987 71 ntBASIC-0.26□□□□□ -2.45
VPS29Q9UBQ0 RNU6-541P-201ENST00000384709 110 ntBASIC-0.26□□□□□ -2.45
VPS29Q9UBQ0 MIR489-201ENST00000384923 84 ntBASIC-0.26□□□□□ -2.45
VPS29Q9UBQ0 RNU6-159P-201ENST00000391080 106 ntBASIC-0.26□□□□□ -2.45
VPS29Q9UBQ0 AC079354.2-201ENST00000453523 154 ntBASIC-0.26□□□□□ -2.45
VPS29Q9UBQ0 MTND2P14-201ENST00000482139 351 ntBASIC-0.26□□□□□ -2.45
VPS29Q9UBQ0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-0.26□□□□□ -2.45
VPS29Q9UBQ0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC-0.26□□□□□ -2.45
VPS29Q9UBQ0 UBL5P4-201ENST00000562584 236 ntBASIC-0.26□□□□□ -2.45
VPS29Q9UBQ0 MIR3678-201ENST00000578455 94 ntBASIC-0.26□□□□□ -2.45
VPS29Q9UBQ0 AC011458.1-201ENST00000604034 617 ntBASIC-0.26□□□□□ -2.45
VPS29Q9UBQ0 AL136370.1-201ENST00000608166 691 ntBASIC-0.26□□□□□ -2.45
VPS29Q9UBQ0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.26□□□□□ -2.45
VPS29Q9UBQ0 AC010608.3-201ENST00000625048 527 ntBASIC-0.26□□□□□ -2.45
VPS29Q9UBQ0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.26□□□□□ -2.45
VPS29Q9UBQ0 RNU6-117P-201ENST00000365415 107 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 RNA5SP496-201ENST00000391240 109 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 SNORA75.6-201ENST00000391318 127 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 MTCYBP4-201ENST00000401524 249 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 MIR1197-201ENST00000408818 88 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 MTCO2P8-201ENST00000412213 658 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 AL593851.1-201ENST00000426171 157 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 MTND1P26-201ENST00000440488 538 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 MTND4LP16-201ENST00000440828 295 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 snoU13.21-201ENST00000459368 105 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 MIR4771-2-201ENST00000577758 74 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 MIR4804-201ENST00000581683 73 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 MIR4771-1-201ENST00000582617 74 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 AF250324.2-201ENST00000608299 610 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 AC090517.2-201ENST00000614966 680 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 AC103705.1-201ENST00000619013 241 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 AC009248.2-201ENST00000619826 254 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 AC127459.3-201ENST00000624328 466 ntBASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.27□□□□□ -2.45
VPS29Q9UBQ0 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 SNORD114-26-201ENST00000363543 72 ntBASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 RNU6-934P-201ENST00000365154 107 ntBASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 RNU6-396P-201ENST00000365369 105 ntBASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 MIR620-201ENST00000385232 95 ntBASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 AL606923.1-201ENST00000406616 190 ntBASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 AL390729.2-201ENST00000416137 156 ntBASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 RNU7-63P-201ENST00000459054 62 ntBASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 SNORA40.12-201ENST00000516329 111 ntBASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 PIGPP4-201ENST00000584447 307 ntBASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 MIR4762-201ENST00000585261 75 ntBASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 AL591926.4-201ENST00000616895 298 ntBASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 AC022306.3-201ENST00000619930 550 ntBASIC-0.28□□□□□ -2.45
VPS29Q9UBQ0 MIR377-201ENST00000362145 69 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 MIR613-201ENST00000385248 95 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 RPL30P16-201ENST00000419341 429 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 AC015818.7-201ENST00000428754 109 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 MTCO2P11-201ENST00000431069 680 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 MTCO2P16-201ENST00000436962 677 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 AC087499.7-201ENST00000441958 109 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 AC073415.1-201ENST00000449240 153 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 MTCO3P38-201ENST00000468910 766 ntBASIC-0.29□□□□□ -2.46
VPS29Q9UBQ0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms