Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 FO393413.1-201ENST00000402892 195 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 MIR1253-201ENST00000408273 105 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 AC025750.2-201ENST00000442609 450 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 AP001486.1-201ENST00000463339 476 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 YWHAEP4-201ENST00000505390 198 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 AC093259.1-201ENST00000509755 300 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 RNU6-1146P-201ENST00000516282 102 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 SNORA64.4-201ENST00000516632 81 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 AC068657.1-201ENST00000520807 306 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 AC011604.1-201ENST00000545978 196 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 UBL5P2-201ENST00000583788 219 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 MIR622-201ENST00000638396 96 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CNTN3Q9P232 AL021368.2-201ENST00000606125 5352 ntBASIC3.41□□□□□ -1.86
CNTN3Q9P232 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
CNTN3Q9P232 RNA5SP383-201ENST00000362934 120 ntBASIC3.4□□□□□ -1.87
CNTN3Q9P232 Y_RNA.332-201ENST00000365271 113 ntBASIC3.4□□□□□ -1.87
CNTN3Q9P232 RNU6-1138P-201ENST00000365359 106 ntBASIC3.4□□□□□ -1.87
CNTN3Q9P232 RNU6-476P-201ENST00000384726 107 ntBASIC3.4□□□□□ -1.87
CNTN3Q9P232 MIR128-1-201ENST00000384921 82 ntBASIC3.4□□□□□ -1.87
CNTN3Q9P232 CYCSP49-201ENST00000420810 319 ntBASIC3.4□□□□□ -1.87
CNTN3Q9P232 SNORD11-201ENST00000459124 84 ntBASIC3.4□□□□□ -1.87
CNTN3Q9P232 RNU1-143P-201ENST00000516296 146 ntBASIC3.4□□□□□ -1.87
CNTN3Q9P232 RNU6-856P-201ENST00000516959 98 ntBASIC3.4□□□□□ -1.87
CNTN3Q9P232 MIR3117-201ENST00000584034 78 ntBASIC3.4□□□□□ -1.87
CNTN3Q9P232 AL356280.1-201ENST00000603614 379 ntBASIC3.4□□□□□ -1.87
CNTN3Q9P232 U1.23-201ENST00000610293 146 ntBASIC3.4□□□□□ -1.87
CNTN3Q9P232 RNU1-68P-201ENST00000615382 146 ntBASIC3.4□□□□□ -1.87
CNTN3Q9P232 U6.73-201ENST00000619194 103 ntBASIC3.4□□□□□ -1.87
CNTN3Q9P232 U1.39-201ENST00000621562 146 ntBASIC3.4□□□□□ -1.87
CNTN3Q9P232 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CNTN3Q9P232 RNU6-1209P-201ENST00000363655 107 ntBASIC3.39□□□□□ -1.87
CNTN3Q9P232 Y_RNA.796-201ENST00000364268 102 ntBASIC3.39□□□□□ -1.87
CNTN3Q9P232 Y_RNA.799-201ENST00000364992 102 ntBASIC3.39□□□□□ -1.87
CNTN3Q9P232 RNU6-1144P-201ENST00000384247 104 ntBASIC3.39□□□□□ -1.87
CNTN3Q9P232 MIR627-201ENST00000384979 97 ntBASIC3.39□□□□□ -1.87
CNTN3Q9P232 MIR520G-201ENST00000385064 90 ntBASIC3.39□□□□□ -1.87
CNTN3Q9P232 Z92545.1-201ENST00000411782 234 ntBASIC3.39□□□□□ -1.87
CNTN3Q9P232 AL158823.1-201ENST00000418441 478 ntBASIC3.39□□□□□ -1.87
CNTN3Q9P232 Z96811.1-201ENST00000445880 108 ntBASIC3.39□□□□□ -1.87
CNTN3Q9P232 OR9P1P-201ENST00000496431 281 ntBASIC3.39□□□□□ -1.87
CNTN3Q9P232 SNORA48.11-201ENST00000517015 89 ntBASIC3.39□□□□□ -1.87
CNTN3Q9P232 U2.20-201ENST00000613956 192 ntBASIC3.39□□□□□ -1.87
CNTN3Q9P232 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.39□□□□□ -1.87
CNTN3Q9P232 U6.95-201ENST00000636931 70 ntBASIC3.39□□□□□ -1.87
CNTN3Q9P232 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CNTN3Q9P232 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CNTN3Q9P232 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.39□□□□□ -1.87
CNTN3Q9P232 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.38□□□□□ -1.87
CNTN3Q9P232 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CNTN3Q9P232 MIR148B-201ENST00000362252 99 ntBASIC3.38□□□□□ -1.87
CNTN3Q9P232 MIR422A-201ENST00000362286 90 ntBASIC3.38□□□□□ -1.87
CNTN3Q9P232 SNORA54-201ENST00000384281 123 ntBASIC3.38□□□□□ -1.87
CNTN3Q9P232 MIR562-201ENST00000384894 95 ntBASIC3.38□□□□□ -1.87
CNTN3Q9P232 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CNTN3Q9P232 AL158147.1-201ENST00000443970 75 ntBASIC3.38□□□□□ -1.87
CNTN3Q9P232 S100A11P2-201ENST00000467589 312 ntBASIC3.38□□□□□ -1.87
CNTN3Q9P232 AC008885.1-201ENST00000514930 301 ntBASIC3.38□□□□□ -1.87
CNTN3Q9P232 RNA5SP341-201ENST00000516261 117 ntBASIC3.38□□□□□ -1.87
CNTN3Q9P232 PRELID2P1-201ENST00000552837 301 ntBASIC3.38□□□□□ -1.87
CNTN3Q9P232 MIR3121-201ENST00000579680 77 ntBASIC3.38□□□□□ -1.87
CNTN3Q9P232 JPX_2.1-201ENST00000614161 69 ntBASIC3.38□□□□□ -1.87
CNTN3Q9P232 Pinc.1-201ENST00000616452 154 ntBASIC3.38□□□□□ -1.87
CNTN3Q9P232 MIR3914-2-201ENST00000637339 95 ntBASIC3.38□□□□□ -1.87
CNTN3Q9P232 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.38□□□□□ -1.87
CNTN3Q9P232 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CNTN3Q9P232 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.37□□□□□ -1.87
CNTN3Q9P232 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.37□□□□□ -1.87
CNTN3Q9P232 RNU6-235P-201ENST00000362644 107 ntBASIC3.37□□□□□ -1.87
CNTN3Q9P232 U8.1-201ENST00000362843 134 ntBASIC3.37□□□□□ -1.87
CNTN3Q9P232 RNU6-525P-201ENST00000363685 104 ntBASIC3.37□□□□□ -1.87
CNTN3Q9P232 RNU6-1336P-201ENST00000383886 109 ntBASIC3.37□□□□□ -1.87
CNTN3Q9P232 AL603914.1-201ENST00000401964 204 ntBASIC3.37□□□□□ -1.87
CNTN3Q9P232 RNU2-63P-201ENST00000410792 194 ntBASIC3.37□□□□□ -1.87
CNTN3Q9P232 AC104332.2-201ENST00000429959 156 ntBASIC3.37□□□□□ -1.87
CNTN3Q9P232 CYCSP26-201ENST00000534107 320 ntBASIC3.37□□□□□ -1.87
CNTN3Q9P232 AC004832.5-201ENST00000608677 401 ntBASIC3.37□□□□□ -1.87
CNTN3Q9P232 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.37□□□□□ -1.87
CNTN3Q9P232 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.37□□□□□ -1.87
CNTN3Q9P232 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CNTN3Q9P232 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CNTN3Q9P232 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CNTN3Q9P232 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.36□□□□□ -1.87
CNTN3Q9P232 RNU1-96P-201ENST00000364163 162 ntBASIC3.36□□□□□ -1.87
CNTN3Q9P232 RNU6-461P-201ENST00000364195 107 ntBASIC3.36□□□□□ -1.87
CNTN3Q9P232 Y_RNA.280-201ENST00000364765 112 ntBASIC3.36□□□□□ -1.87
CNTN3Q9P232 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNTN3Q9P232 SNORD15B-201ENST00000384714 146 ntBASIC3.36□□□□□ -1.87
CNTN3Q9P232 AC092185.1-201ENST00000491371 97 ntBASIC3.36□□□□□ -1.87
CNTN3Q9P232 PDCD5P2-201ENST00000507570 312 ntBASIC3.36□□□□□ -1.87
CNTN3Q9P232 RNU7-149P-201ENST00000516739 59 ntBASIC3.36□□□□□ -1.87
CNTN3Q9P232 AL162274.2-201ENST00000614406 332 ntBASIC3.36□□□□□ -1.87
CNTN3Q9P232 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.36□□□□□ -1.87
CNTN3Q9P232 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNTN3Q9P232 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CNTN3Q9P232 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.36□□□□□ -1.87
CNTN3Q9P232 Y_RNA.91-201ENST00000363042 107 ntBASIC3.35□□□□□ -1.87
CNTN3Q9P232 RNU6-743P-201ENST00000364151 106 ntBASIC3.35□□□□□ -1.87
CNTN3Q9P232 Y_RNA.294-201ENST00000364916 102 ntBASIC3.35□□□□□ -1.87
CNTN3Q9P232 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 274.9 ms