Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 SNORD114-1-201ENST00000362705 72 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 Y_RNA.124-201ENST00000363339 93 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 SNORA63.7-201ENST00000365579 123 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 RNU6-296P-201ENST00000384608 107 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 Y_RNA.570-201ENST00000384750 101 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 MIR873-201ENST00000401120 77 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 AC019129.1-201ENST00000403786 261 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 RNU2-2P-201ENST00000410396 191 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 RNU6-130P-201ENST00000411112 103 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 RPL23AP7-203ENST00000449021 469 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 AL021397.1-201ENST00000451806 248 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 AC025033.1-201ENST00000463883 194 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 RPL23AP63-201ENST00000498752 471 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 MRPS17P9-201ENST00000511924 393 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 RNU7-99P-201ENST00000516271 62 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 RNA5SP437-201ENST00000517249 129 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 AP003072.1-201ENST00000531740 145 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 MIR4680-201ENST00000580906 66 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 MIR4713-201ENST00000582691 75 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 AC073413.2-201ENST00000604332 360 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 AL353997.5-201ENST00000618886 171 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 U6.108-201ENST00000637764 58 ntBASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HCN3Q9P1Z3 AL359851.1-201ENST00000569460 4997 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 SNORD115-30-201ENST00000364117 82 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 Y_RNA.331-201ENST00000365267 102 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 SNORA33.2-201ENST00000365413 134 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 RNU6-639P-201ENST00000384074 107 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 Y_RNA.455-201ENST00000384230 98 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 Y_RNA.462-201ENST00000384268 102 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 RNU6-1011P-201ENST00000384668 107 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 RNU6-21P-201ENST00000384710 107 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 RNA5SP109-201ENST00000391010 116 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 AL031003.1-201ENST00000404229 172 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 MIR1252-201ENST00000408861 65 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 RNU4-30P-201ENST00000410245 143 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 RPL23AP36-201ENST00000413895 458 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 HSPE1P9-201ENST00000440046 311 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 SUMO1P2-201ENST00000452524 304 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 RPL36AP21-201ENST00000490372 323 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 AC097462.1-201ENST00000514125 324 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 RNU6-1046P-201ENST00000516538 107 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 RPL21P9-201ENST00000556149 474 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 AC010900.2-201ENST00000604508 210 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 AC022441.3-201ENST00000605737 136 ntBASIC1.89□□□□□ -2.11
HCN3Q9P1Z3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
HCN3Q9P1Z3 RNU1-22P-201ENST00000363334 158 ntBASIC1.88□□□□□ -2.11
HCN3Q9P1Z3 RNU6-376P-201ENST00000384731 106 ntBASIC1.88□□□□□ -2.11
HCN3Q9P1Z3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HCN3Q9P1Z3 AL390729.2-201ENST00000416137 156 ntBASIC1.88□□□□□ -2.11
HCN3Q9P1Z3 AC005042.3-201ENST00000453230 174 ntBASIC1.88□□□□□ -2.11
HCN3Q9P1Z3 SNORA70.12-201ENST00000516084 153 ntBASIC1.88□□□□□ -2.11
HCN3Q9P1Z3 RNU6-966P-201ENST00000516479 104 ntBASIC1.88□□□□□ -2.11
HCN3Q9P1Z3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.88□□□□□ -2.11
HCN3Q9P1Z3 MIR3935-201ENST00000583472 104 ntBASIC1.88□□□□□ -2.11
HCN3Q9P1Z3 RAC1P9-201ENST00000604990 392 ntBASIC1.88□□□□□ -2.11
HCN3Q9P1Z3 AC005828.6-201ENST00000606610 232 ntBASIC1.88□□□□□ -2.11
HCN3Q9P1Z3 AC127459.3-201ENST00000624328 466 ntBASIC1.88□□□□□ -2.11
HCN3Q9P1Z3 SNORA63-201ENST00000363450 132 ntBASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 SNORA63D-201ENST00000364359 132 ntBASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 RNU6-439P-201ENST00000384188 106 ntBASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 RNU6-136P-201ENST00000384663 107 ntBASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 RNU6-1199P-201ENST00000411249 104 ntBASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 RPS26P55-201ENST00000471178 356 ntBASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 RNU6-1278P-201ENST00000516130 107 ntBASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 MIR514B-201ENST00000516774 80 ntBASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 RNU6-1137P-201ENST00000517073 99 ntBASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 RNU6-897P-201ENST00000517135 105 ntBASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 RNU7-128P-201ENST00000517247 62 ntBASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 AC022254.1-201ENST00000567857 235 ntBASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 MIR5089-201ENST00000580047 84 ntBASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.87□□□□□ -2.11
HCN3Q9P1Z3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 SNORA4.2-201ENST00000365313 147 ntBASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 Y_RNA.380-201ENST00000365663 111 ntBASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 RNU6-505P-201ENST00000384427 107 ntBASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 RPS26P45-201ENST00000471748 340 ntBASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 RNU6-436P-201ENST00000516171 114 ntBASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 RNU6-63P-201ENST00000516690 95 ntBASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 RNA5SP481-201ENST00000516814 122 ntBASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 SNORA40.15-201ENST00000516884 107 ntBASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 AC131281.1-201ENST00000522984 164 ntBASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms