Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 SNORA54-201ENST00000384281 123 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 MIR29B2-201ENST00000385055 81 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 AC022018.1-201ENST00000430685 241 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 AC244505.4-201ENST00000434905 287 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 SSXP5-201ENST00000443473 287 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 SNRPGP8-201ENST00000454064 226 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 RPS3P1-201ENST00000456781 192 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 RN7SL499P-201ENST00000481141 276 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 AC083906.5-201ENST00000503722 328 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 RNU7-115P-201ENST00000516433 55 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 AL442128.1-201ENST00000615151 90 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 MIR548AY-201ENST00000617669 107 ntBASIC3.34□□□□□ -1.87
LMCD1Q9NZU5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
LMCD1Q9NZU5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
LMCD1Q9NZU5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.34□□□□□ -1.88
LMCD1Q9NZU5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 RNU6-508P-201ENST00000363231 103 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 SNORD45.3-201ENST00000363836 72 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 Y_RNA.219-201ENST00000364232 113 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 RNU6-1107P-201ENST00000364817 104 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 RNU6-813P-201ENST00000384691 107 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 MIR518C-201ENST00000384822 101 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 RPL21P3-201ENST00000395517 478 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 EDDM3CP-201ENST00000415977 425 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 AC104332.2-201ENST00000429959 156 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 AC245047.4-201ENST00000433189 144 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 AC105272.1-201ENST00000438604 198 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 AL135938.1-201ENST00000443141 297 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 snoU13.14-201ENST00000459372 104 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 AC112771.1-201ENST00000463581 102 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 AP000867.2-201ENST00000532468 320 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 RPL30P11-203ENST00000598995 310 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 RNU6-91P-201ENST00000607774 107 ntBASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LMCD1Q9NZU5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 AC010889.1-201ENST00000566193 2666 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 AC093831.2-201ENST00000624393 3427 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 AC062016.1-201ENST00000355719 319 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 RNU6-655P-201ENST00000362858 107 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 Y_RNA.163-201ENST00000363702 113 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 RNU6-647P-201ENST00000364243 107 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 Y_RNA.346-201ENST00000365385 112 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 RNU6-198P-201ENST00000384258 104 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 RNU6-851P-201ENST00000384565 107 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 Y_RNA.587-201ENST00000391210 103 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 RNA5SP229-201ENST00000410809 99 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 AC010099.1-201ENST00000455434 375 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 RNA5SP395-201ENST00000516567 118 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 SNORD19.2-201ENST00000516978 73 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 PRELID2P1-201ENST00000552837 301 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 MIR4319-201ENST00000577285 85 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 AC025166.1-201ENST00000612411 163 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 AC009831.4-201ENST00000620744 325 ntBASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.32□□□□□ -1.88
LMCD1Q9NZU5 RNU6-1210P-201ENST00000363775 107 ntBASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 RNU6-978P-201ENST00000364371 103 ntBASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 SNORD116-13-201ENST00000384408 92 ntBASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 RNY1P7-201ENST00000384743 110 ntBASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 MIR887-201ENST00000401258 79 ntBASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 RNA5SP225-201ENST00000410874 135 ntBASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 RN7SKP43-201ENST00000516173 320 ntBASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 SNORA40.13-201ENST00000516379 120 ntBASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 RNU6-1337P-201ENST00000516525 95 ntBASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 MIR378D2-201ENST00000580636 98 ntBASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 uc_338.25-201ENST00000613756 156 ntBASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 AC134878.1-201ENST00000619901 243 ntBASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 AC006111.3-201ENST00000622137 383 ntBASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
LMCD1Q9NZU5 MTND5P18-201ENST00000445624 1801 ntBASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 Y_RNA.85-201ENST00000363014 111 ntBASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 RNY3P5-201ENST00000384127 102 ntBASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 AL603914.1-201ENST00000401964 204 ntBASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 AL355796.1-201ENST00000406706 323 ntBASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 SNORA79-201ENST00000408376 140 ntBASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 MIR1278-201ENST00000408753 81 ntBASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 RNA5SP38-201ENST00000410750 119 ntBASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 AC063976.3-201ENST00000426849 329 ntBASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 HMGN1P18-201ENST00000457642 277 ntBASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 RNU7-23P-201ENST00000459465 62 ntBASIC3.3□□□□□ -1.88
LMCD1Q9NZU5 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms