Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 PRELID2P1-201ENST00000552837 301 ntBASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 AC091544.4-201ENST00000555268 342 ntBASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 AC011603.4-201ENST00000611325 277 ntBASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 AC080128.1-201ENST00000474389 1917 ntBASIC3.32□□□□□ -1.88
TMEM39AQ9NV64 MAPK10-362ENST00000641864 4484 ntBASIC3.31□□□□□ -1.88
TMEM39AQ9NV64 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TMEM39AQ9NV64 SNORA68.1-201ENST00000364537 132 ntBASIC3.31□□□□□ -1.88
TMEM39AQ9NV64 SNORD116-14-201ENST00000383894 92 ntBASIC3.31□□□□□ -1.88
TMEM39AQ9NV64 SNORD116-17-201ENST00000383929 92 ntBASIC3.31□□□□□ -1.88
TMEM39AQ9NV64 SNORA72-201ENST00000384339 132 ntBASIC3.31□□□□□ -1.88
TMEM39AQ9NV64 SNORD116-15-201ENST00000384445 92 ntBASIC3.31□□□□□ -1.88
TMEM39AQ9NV64 RNU6-851P-201ENST00000384565 107 ntBASIC3.31□□□□□ -1.88
TMEM39AQ9NV64 SNORD116-19-201ENST00000384729 92 ntBASIC3.31□□□□□ -1.88
TMEM39AQ9NV64 SNORA75.5-201ENST00000391291 81 ntBASIC3.31□□□□□ -1.88
TMEM39AQ9NV64 RPS27P29-201ENST00000463110 252 ntBASIC3.31□□□□□ -1.88
TMEM39AQ9NV64 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.31□□□□□ -1.88
TMEM39AQ9NV64 AL359881.1-201ENST00000602916 267 ntBASIC3.31□□□□□ -1.88
TMEM39AQ9NV64 AL049861.1-201ENST00000603130 150 ntBASIC3.31□□□□□ -1.88
TMEM39AQ9NV64 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.31□□□□□ -1.88
TMEM39AQ9NV64 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 RNU1-22P-201ENST00000363334 158 ntBASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 RNU6-805P-201ENST00000365643 106 ntBASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 AC087499.2-201ENST00000432861 149 ntBASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 MTCO1P44-201ENST00000441935 243 ntBASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 CYP2C59P-201ENST00000457790 269 ntBASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 RPS29P12-201ENST00000460178 152 ntBASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 RNU2-56P-201ENST00000516826 190 ntBASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 MIR378D2-201ENST00000580636 98 ntBASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 MIR4438-201ENST00000585271 93 ntBASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 AL929325.1-201ENST00000603096 117 ntBASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 AL021707.8-201ENST00000609428 183 ntBASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TMEM39AQ9NV64 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 RNY1P11-201ENST00000363759 113 ntBASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 RNU6-1080P-201ENST00000383982 107 ntBASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 MIR196B-201ENST00000384852 84 ntBASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 RNA5SP293-201ENST00000410527 113 ntBASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 CYCSP49-201ENST00000420810 319 ntBASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 AL357134.1-201ENST00000445848 426 ntBASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 YWHAEP4-201ENST00000505390 198 ntBASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 AC023141.11-201ENST00000508864 202 ntBASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 AC097462.1-201ENST00000514125 324 ntBASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 MIR2276-201ENST00000516886 89 ntBASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 RNU7-172P-201ENST00000517125 64 ntBASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 AP001328.1-201ENST00000528550 176 ntBASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 AP001340.1-201ENST00000624405 217 ntBASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.29□□□□□ -1.88
TMEM39AQ9NV64 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.28□□□□□ -1.88
TMEM39AQ9NV64 RNU1-23P-201ENST00000363361 144 ntBASIC3.28□□□□□ -1.88
TMEM39AQ9NV64 RNU6-1082P-201ENST00000364574 107 ntBASIC3.28□□□□□ -1.88
TMEM39AQ9NV64 RNU6-80P-201ENST00000384195 107 ntBASIC3.28□□□□□ -1.88
TMEM39AQ9NV64 MIR95-201ENST00000385072 81 ntBASIC3.28□□□□□ -1.88
TMEM39AQ9NV64 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.28□□□□□ -1.88
TMEM39AQ9NV64 AC093259.1-201ENST00000509755 300 ntBASIC3.28□□□□□ -1.88
TMEM39AQ9NV64 SNORA4.4-201ENST00000515921 135 ntBASIC3.28□□□□□ -1.88
TMEM39AQ9NV64 AC107016.2-201ENST00000547968 190 ntBASIC3.28□□□□□ -1.88
TMEM39AQ9NV64 MIR3117-201ENST00000584034 78 ntBASIC3.28□□□□□ -1.88
TMEM39AQ9NV64 AC120024.3-201ENST00000603167 156 ntBASIC3.28□□□□□ -1.88
TMEM39AQ9NV64 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TMEM39AQ9NV64 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 Y_RNA.203-201ENST00000364106 102 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 Y_RNA.273-201ENST00000364703 102 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 RNU6-597P-201ENST00000365620 102 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 Y_RNA.432-201ENST00000384087 111 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 MIR1253-201ENST00000408273 105 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 RNU2-55P-201ENST00000411146 174 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 AC123900.1-201ENST00000420390 96 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 TRIAP1P1-201ENST00000427062 225 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 RPS4XP11-201ENST00000446897 772 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 AC010401.1-201ENST00000463867 348 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 RN7SL442P-201ENST00000473804 320 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 AC092185.1-201ENST00000491371 97 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 RNU4-57P-201ENST00000515980 135 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 RNU6-991P-201ENST00000516168 107 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 RNU6-197P-201ENST00000516680 100 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TMEM39AQ9NV64 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 Y_RNA.251-201ENST00000364551 99 ntBASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 Y_RNA.353-201ENST00000365440 108 ntBASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 DYNLT3P1-201ENST00000378574 347 ntBASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 SNORD20-201ENST00000384550 80 ntBASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 RNU2-52P-201ENST00000410680 190 ntBASIC3.26□□□□□ -1.89
TMEM39AQ9NV64 SNORD109B-201ENST00000458961 67 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms