Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 U6.108-201ENST00000637764 58 ntBASIC1.89□□□□□ -2.11
SMC4Q9NTJ3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 MIR410-201ENST00000362222 80 ntBASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 RNU6-474P-201ENST00000384243 107 ntBASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 RNA5SP323-201ENST00000391094 133 ntBASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 AC022028.1-201ENST00000412054 408 ntBASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 AL161935.2-201ENST00000414627 60 ntBASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 AC073910.1-201ENST00000445047 438 ntBASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 SNORA31.24-201ENST00000517232 57 ntBASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 MIR4285-201ENST00000581001 85 ntBASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 MIR5188-201ENST00000583467 113 ntBASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 MIR4781-201ENST00000585250 76 ntBASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 U6.73-201ENST00000619194 103 ntBASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SMC4Q9NTJ3 Y_RNA.138-201ENST00000363462 102 ntBASIC1.87□□□□□ -2.11
SMC4Q9NTJ3 RNU6-950P-201ENST00000384651 107 ntBASIC1.87□□□□□ -2.11
SMC4Q9NTJ3 AL355796.1-201ENST00000406706 323 ntBASIC1.87□□□□□ -2.11
SMC4Q9NTJ3 RAB28P5-201ENST00000427490 651 ntBASIC1.87□□□□□ -2.11
SMC4Q9NTJ3 AC005002.2-201ENST00000438228 269 ntBASIC1.87□□□□□ -2.11
SMC4Q9NTJ3 RNU6-625P-201ENST00000459412 107 ntBASIC1.87□□□□□ -2.11
SMC4Q9NTJ3 AC005908.1-201ENST00000468701 347 ntBASIC1.87□□□□□ -2.11
SMC4Q9NTJ3 AL163195.1-201ENST00000496941 348 ntBASIC1.87□□□□□ -2.11
SMC4Q9NTJ3 RNU6-966P-201ENST00000516479 104 ntBASIC1.87□□□□□ -2.11
SMC4Q9NTJ3 RNU6-1012P-201ENST00000516606 109 ntBASIC1.87□□□□□ -2.11
SMC4Q9NTJ3 MIR4422-201ENST00000581938 83 ntBASIC1.87□□□□□ -2.11
SMC4Q9NTJ3 AC006157.1-201ENST00000611750 366 ntBASIC1.87□□□□□ -2.11
SMC4Q9NTJ3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.86□□□□□ -2.11
SMC4Q9NTJ3 RNU6-797P-201ENST00000363101 109 ntBASIC1.86□□□□□ -2.11
SMC4Q9NTJ3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.86□□□□□ -2.11
SMC4Q9NTJ3 Y_RNA.395-201ENST00000383945 109 ntBASIC1.86□□□□□ -2.11
SMC4Q9NTJ3 RNY3P4-201ENST00000384428 101 ntBASIC1.86□□□□□ -2.11
SMC4Q9NTJ3 PMCHL1-202ENST00000423102 261 ntBASIC1.86□□□□□ -2.11
SMC4Q9NTJ3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.86□□□□□ -2.11
SMC4Q9NTJ3 Y_RNA.639-201ENST00000458981 102 ntBASIC1.86□□□□□ -2.11
SMC4Q9NTJ3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.86□□□□□ -2.11
SMC4Q9NTJ3 AC010598.1-201ENST00000510378 103 ntBASIC1.86□□□□□ -2.11
SMC4Q9NTJ3 RNU6-976P-201ENST00000516086 111 ntBASIC1.86□□□□□ -2.11
SMC4Q9NTJ3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.86□□□□□ -2.11
SMC4Q9NTJ3 AL160413.1-201ENST00000622780 310 ntBASIC1.86□□□□□ -2.11
SMC4Q9NTJ3 U6.92-201ENST00000636464 89 ntBASIC1.86□□□□□ -2.11
SMC4Q9NTJ3 AC091812.1-201ENST00000432235 1948 ntBASIC1.85□□□□□ -2.11
SMC4Q9NTJ3 COX6CP10-201ENST00000416832 224 ntBASIC1.85□□□□□ -2.11
SMC4Q9NTJ3 MTND1P14-201ENST00000427400 950 ntBASIC1.85□□□□□ -2.11
SMC4Q9NTJ3 AL160004.2-201ENST00000432935 350 ntBASIC1.85□□□□□ -2.11
SMC4Q9NTJ3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.85□□□□□ -2.11
SMC4Q9NTJ3 AL606517.2-201ENST00000442855 241 ntBASIC1.85□□□□□ -2.11
SMC4Q9NTJ3 RPS27P1-201ENST00000450552 247 ntBASIC1.85□□□□□ -2.11
SMC4Q9NTJ3 RNU7-99P-201ENST00000516271 62 ntBASIC1.85□□□□□ -2.11
SMC4Q9NTJ3 RNU7-128P-201ENST00000517247 62 ntBASIC1.85□□□□□ -2.11
SMC4Q9NTJ3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.85□□□□□ -2.11
SMC4Q9NTJ3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.85□□□□□ -2.11
SMC4Q9NTJ3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.85□□□□□ -2.11
SMC4Q9NTJ3 MIR4659A-201ENST00000580269 81 ntBASIC1.85□□□□□ -2.11
SMC4Q9NTJ3 VN1R91P-201ENST00000594377 169 ntBASIC1.85□□□□□ -2.11
SMC4Q9NTJ3 AL512598.1-201ENST00000610158 273 ntBASIC1.85□□□□□ -2.11
SMC4Q9NTJ3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 MIR302D-201ENST00000362275 68 ntBASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 Y_RNA.112-201ENST00000363250 102 ntBASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 MIR194-1-201ENST00000384892 85 ntBASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 RNU1-78P-201ENST00000391248 165 ntBASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 AC245517.4-201ENST00000448601 281 ntBASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 RNU6-1170P-201ENST00000515974 106 ntBASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 AC023157.2-201ENST00000540596 141 ntBASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 MIR4709-201ENST00000577272 72 ntBASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 AC004467.1-201ENST00000615678 330 ntBASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 AC240442.1-201ENST00000616055 283 ntBASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 AC090971.5-201ENST00000621102 293 ntBASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 AC090574.1-201ENST00000623186 233 ntBASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 AL606534.2-204ENST00000635008 178 ntBASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 U6.115-201ENST00000636045 103 ntBASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 MIR3674-201ENST00000636576 68 ntBASIC1.84□□□□□ -2.11
SMC4Q9NTJ3 AC100821.1-201ENST00000523153 2479 ntBASIC1.83□□□□□ -2.12
SMC4Q9NTJ3 MIR337-201ENST00000362281 93 ntBASIC1.83□□□□□ -2.12
SMC4Q9NTJ3 Y_RNA.101-201ENST00000363154 102 ntBASIC1.83□□□□□ -2.12
SMC4Q9NTJ3 SNORA4.2-201ENST00000365313 147 ntBASIC1.83□□□□□ -2.12
SMC4Q9NTJ3 SNORA20B-201ENST00000384220 132 ntBASIC1.83□□□□□ -2.12
SMC4Q9NTJ3 MRPS10P1-201ENST00000448483 130 ntBASIC1.83□□□□□ -2.12
SMC4Q9NTJ3 RNU7-94P-201ENST00000459576 63 ntBASIC1.83□□□□□ -2.12
SMC4Q9NTJ3 AC023442.1-201ENST00000531247 422 ntBASIC1.83□□□□□ -2.12
SMC4Q9NTJ3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.83□□□□□ -2.12
SMC4Q9NTJ3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SMC4Q9NTJ3 RNU6-626P-201ENST00000363354 107 ntBASIC1.82□□□□□ -2.12
SMC4Q9NTJ3 Y_RNA.216-201ENST00000364205 93 ntBASIC1.82□□□□□ -2.12
SMC4Q9NTJ3 MIR628-201ENST00000385229 95 ntBASIC1.82□□□□□ -2.12
SMC4Q9NTJ3 RPL21P1-201ENST00000399532 476 ntBASIC1.82□□□□□ -2.12
SMC4Q9NTJ3 RNU6-1186P-201ENST00000410429 97 ntBASIC1.82□□□□□ -2.12
SMC4Q9NTJ3 RN7SKP51-201ENST00000410781 304 ntBASIC1.82□□□□□ -2.12
SMC4Q9NTJ3 MCFD2P1-201ENST00000417812 300 ntBASIC1.82□□□□□ -2.12
SMC4Q9NTJ3 BTF3P4-201ENST00000418852 495 ntBASIC1.82□□□□□ -2.12
SMC4Q9NTJ3 MTND4P19-201ENST00000446659 478 ntBASIC1.82□□□□□ -2.12
SMC4Q9NTJ3 HSPE1P24-201ENST00000450782 238 ntBASIC1.82□□□□□ -2.12
SMC4Q9NTJ3 RNU1-98P-201ENST00000458992 160 ntBASIC1.82□□□□□ -2.12
SMC4Q9NTJ3 RNU6-911P-201ENST00000516523 104 ntBASIC1.82□□□□□ -2.12
SMC4Q9NTJ3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 250 ms