Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
VPS45Q9NRW7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS45Q9NRW7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VPS45Q9NRW7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.136-201ENST00000363444 102 ntBASIC2.34□□□□□ -2.03
VPS45Q9NRW7 RNU6-418P-201ENST00000384035 107 ntBASIC2.34□□□□□ -2.03
VPS45Q9NRW7 U3.40-201ENST00000408706 208 ntBASIC2.34□□□□□ -2.03
VPS45Q9NRW7 RNU6-57P-201ENST00000411348 103 ntBASIC2.34□□□□□ -2.03
VPS45Q9NRW7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.34□□□□□ -2.03
VPS45Q9NRW7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.34□□□□□ -2.03
VPS45Q9NRW7 SCARNA24.2-201ENST00000516968 130 ntBASIC2.34□□□□□ -2.03
VPS45Q9NRW7 U1.36-201ENST00000620684 176 ntBASIC2.34□□□□□ -2.03
VPS45Q9NRW7 MIR6766-201ENST00000622641 72 ntBASIC2.34□□□□□ -2.03
VPS45Q9NRW7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
VPS45Q9NRW7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
VPS45Q9NRW7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
VPS45Q9NRW7 SNORD115-30-201ENST00000364117 82 ntBASIC2.33□□□□□ -2.04
VPS45Q9NRW7 Y_RNA.338-201ENST00000365320 114 ntBASIC2.33□□□□□ -2.04
VPS45Q9NRW7 Y_RNA.352-201ENST00000365439 102 ntBASIC2.33□□□□□ -2.04
VPS45Q9NRW7 RNU6-514P-201ENST00000384208 107 ntBASIC2.33□□□□□ -2.04
VPS45Q9NRW7 Y_RNA.478-201ENST00000384358 107 ntBASIC2.33□□□□□ -2.04
VPS45Q9NRW7 AL512604.1-201ENST00000404812 257 ntBASIC2.33□□□□□ -2.04
VPS45Q9NRW7 AC018634.1-201ENST00000437554 401 ntBASIC2.33□□□□□ -2.04
VPS45Q9NRW7 MTCO1P44-201ENST00000441935 243 ntBASIC2.33□□□□□ -2.04
VPS45Q9NRW7 AC010531.2-201ENST00000465012 153 ntBASIC2.33□□□□□ -2.04
VPS45Q9NRW7 IGLV3-17-201ENST00000519099 244 ntBASIC2.33□□□□□ -2.04
VPS45Q9NRW7 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS45Q9NRW7 U6.115-201ENST00000636045 103 ntBASIC2.33□□□□□ -2.04
VPS45Q9NRW7 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.33□□□□□ -2.04
VPS45Q9NRW7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.32□□□□□ -2.04
VPS45Q9NRW7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
VPS45Q9NRW7 SNORA25.1-201ENST00000362326 128 ntBASIC2.32□□□□□ -2.04
VPS45Q9NRW7 RNU6-1266P-201ENST00000362794 105 ntBASIC2.32□□□□□ -2.04
VPS45Q9NRW7 RNU6-324P-201ENST00000363957 106 ntBASIC2.32□□□□□ -2.04
VPS45Q9NRW7 Y_RNA.416-201ENST00000384014 113 ntBASIC2.32□□□□□ -2.04
VPS45Q9NRW7 AL158823.1-201ENST00000418441 478 ntBASIC2.32□□□□□ -2.04
VPS45Q9NRW7 AC008134.1-201ENST00000420943 193 ntBASIC2.32□□□□□ -2.04
VPS45Q9NRW7 RPS15AP28-201ENST00000435088 386 ntBASIC2.32□□□□□ -2.04
VPS45Q9NRW7 MRPS10P1-201ENST00000448483 130 ntBASIC2.32□□□□□ -2.04
VPS45Q9NRW7 RNU6-1023P-201ENST00000516137 106 ntBASIC2.32□□□□□ -2.04
VPS45Q9NRW7 RNU6-436P-201ENST00000516171 114 ntBASIC2.32□□□□□ -2.04
VPS45Q9NRW7 MIR3128-201ENST00000581957 66 ntBASIC2.32□□□□□ -2.04
VPS45Q9NRW7 AC005786.1-201ENST00000588553 154 ntBASIC2.32□□□□□ -2.04
VPS45Q9NRW7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS45Q9NRW7 MIR6840-201ENST00000611937 71 ntBASIC2.32□□□□□ -2.04
VPS45Q9NRW7 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
VPS45Q9NRW7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS45Q9NRW7 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
VPS45Q9NRW7 RNU6-23P-201ENST00000363283 107 ntBASIC2.31□□□□□ -2.04
VPS45Q9NRW7 Y_RNA.418-201ENST00000384029 102 ntBASIC2.31□□□□□ -2.04
VPS45Q9NRW7 AL031003.1-201ENST00000404229 172 ntBASIC2.31□□□□□ -2.04
VPS45Q9NRW7 AC024067.1-201ENST00000426199 223 ntBASIC2.31□□□□□ -2.04
VPS45Q9NRW7 AL353689.1-201ENST00000438895 199 ntBASIC2.31□□□□□ -2.04
VPS45Q9NRW7 RNA5SP233-201ENST00000459153 113 ntBASIC2.31□□□□□ -2.04
VPS45Q9NRW7 AC025647.1-201ENST00000517879 253 ntBASIC2.31□□□□□ -2.04
VPS45Q9NRW7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.31□□□□□ -2.04
VPS45Q9NRW7 MIR3169-201ENST00000578032 83 ntBASIC2.31□□□□□ -2.04
VPS45Q9NRW7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS45Q9NRW7 MIR5694-201ENST00000581190 76 ntBASIC2.31□□□□□ -2.04
VPS45Q9NRW7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.31□□□□□ -2.04
VPS45Q9NRW7 AC005828.6-201ENST00000606610 232 ntBASIC2.31□□□□□ -2.04
VPS45Q9NRW7 U2.14-201ENST00000615943 113 ntBASIC2.31□□□□□ -2.04
VPS45Q9NRW7 MIR340-201ENST00000362125 95 ntBASIC2.3□□□□□ -2.04
VPS45Q9NRW7 SNORD114-7-201ENST00000362520 77 ntBASIC2.3□□□□□ -2.04
VPS45Q9NRW7 RNA5SP493-201ENST00000364115 91 ntBASIC2.3□□□□□ -2.04
VPS45Q9NRW7 SNORA20.1-201ENST00000364790 130 ntBASIC2.3□□□□□ -2.04
VPS45Q9NRW7 Y_RNA.329-201ENST00000365209 107 ntBASIC2.3□□□□□ -2.04
VPS45Q9NRW7 Y_RNA.477-201ENST00000384352 108 ntBASIC2.3□□□□□ -2.04
VPS45Q9NRW7 RNU6-1248P-201ENST00000391096 64 ntBASIC2.3□□□□□ -2.04
VPS45Q9NRW7 MTCO1P5-201ENST00000433573 344 ntBASIC2.3□□□□□ -2.04
VPS45Q9NRW7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS45Q9NRW7 MTND1P19-201ENST00000511780 315 ntBASIC2.3□□□□□ -2.04
VPS45Q9NRW7 Y_RNA.680-201ENST00000516441 93 ntBASIC2.3□□□□□ -2.04
VPS45Q9NRW7 RNU6-856P-201ENST00000516959 98 ntBASIC2.3□□□□□ -2.04
VPS45Q9NRW7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.3□□□□□ -2.04
VPS45Q9NRW7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.3□□□□□ -2.04
VPS45Q9NRW7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS45Q9NRW7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
VPS45Q9NRW7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS45Q9NRW7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VPS45Q9NRW7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS45Q9NRW7 AL356292.1-201ENST00000283110 373 ntBASIC2.29□□□□□ -2.04
VPS45Q9NRW7 Y_RNA.4-201ENST00000362333 112 ntBASIC2.29□□□□□ -2.04
VPS45Q9NRW7 Y_RNA.20-201ENST00000362479 113 ntBASIC2.29□□□□□ -2.04
VPS45Q9NRW7 Y_RNA.60-201ENST00000362831 98 ntBASIC2.29□□□□□ -2.04
VPS45Q9NRW7 RNU6-379P-201ENST00000363813 104 ntBASIC2.29□□□□□ -2.04
VPS45Q9NRW7 RNU6-1240P-201ENST00000365155 104 ntBASIC2.29□□□□□ -2.04
VPS45Q9NRW7 Y_RNA.361-201ENST00000365515 120 ntBASIC2.29□□□□□ -2.04
VPS45Q9NRW7 MIR17-201ENST00000385012 84 ntBASIC2.29□□□□□ -2.04
VPS45Q9NRW7 AL603910.2-201ENST00000407268 136 ntBASIC2.29□□□□□ -2.04
VPS45Q9NRW7 BX510359.4-201ENST00000423750 193 ntBASIC2.29□□□□□ -2.04
VPS45Q9NRW7 SNORD65B-201ENST00000459126 73 ntBASIC2.29□□□□□ -2.04
VPS45Q9NRW7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
VPS45Q9NRW7 AC010598.1-201ENST00000510378 103 ntBASIC2.29□□□□□ -2.04
VPS45Q9NRW7 SNORA70.12-201ENST00000516084 153 ntBASIC2.29□□□□□ -2.04
VPS45Q9NRW7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.29□□□□□ -2.04
VPS45Q9NRW7 DEFB117-201ENST00000602356 141 ntBASIC2.29□□□□□ -2.04
VPS45Q9NRW7 MIR219B-201ENST00000637023 88 ntBASIC2.29□□□□□ -2.04
VPS45Q9NRW7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS45Q9NRW7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms