Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
VTA1Q9NP79 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.62□□□□□ -1.99
VTA1Q9NP79 AC005786.1-201ENST00000588553 154 ntBASIC2.62□□□□□ -1.99
VTA1Q9NP79 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.62□□□□□ -1.99
VTA1Q9NP79 AL162424.1-201ENST00000602325 221 ntBASIC2.62□□□□□ -1.99
VTA1Q9NP79 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.62□□□□□ -1.99
VTA1Q9NP79 AC141273.2-201ENST00000618989 130 ntBASIC2.62□□□□□ -1.99
VTA1Q9NP79 MIR6873-201ENST00000622788 63 ntBASIC2.62□□□□□ -1.99
VTA1Q9NP79 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VTA1Q9NP79 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
VTA1Q9NP79 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VTA1Q9NP79 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
VTA1Q9NP79 Y_RNA.82-201ENST00000363000 102 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 Y_RNA.92-201ENST00000363043 102 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 RNU6-379P-201ENST00000363813 104 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 SNORD114-6-201ENST00000364393 72 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 Y_RNA.235-201ENST00000364412 102 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 Y_RNA.306-201ENST00000365015 102 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 Y_RNA.312-201ENST00000365089 102 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 Y_RNA.322-201ENST00000365151 102 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 SNORA11.4-201ENST00000408823 129 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 CST2P1-201ENST00000425770 87 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 Y_RNA.650-201ENST00000459002 102 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 RNU6-1278P-201ENST00000516130 107 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 RNU4-71P-201ENST00000516258 113 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 Y_RNA.777-201ENST00000516982 102 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 RNU6-794P-201ENST00000517261 64 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 AC024995.1-201ENST00000523014 93 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 AC007336.1-201ENST00000576365 3828 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 Y_RNA.771-201ENST00000598668 102 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 Y_RNA.789-201ENST00000622480 102 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 AC092881.1-201ENST00000638218 2733 ntBASIC2.61□□□□□ -1.99
VTA1Q9NP79 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VTA1Q9NP79 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
VTA1Q9NP79 RNU1-52P-201ENST00000384190 164 ntBASIC2.6□□□□□ -1.99
VTA1Q9NP79 RPS27P22-201ENST00000478056 241 ntBASIC2.6□□□□□ -1.99
VTA1Q9NP79 SNORA31.11-201ENST00000516528 139 ntBASIC2.6□□□□□ -1.99
VTA1Q9NP79 MIR3169-201ENST00000578032 83 ntBASIC2.6□□□□□ -1.99
VTA1Q9NP79 AC007229.1-201ENST00000590455 412 ntBASIC2.6□□□□□ -1.99
VTA1Q9NP79 AC078899.2-201ENST00000595282 212 ntBASIC2.6□□□□□ -1.99
VTA1Q9NP79 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.6□□□□□ -1.99
VTA1Q9NP79 U6.73-201ENST00000619194 103 ntBASIC2.6□□□□□ -1.99
VTA1Q9NP79 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.6□□□□□ -1.99
VTA1Q9NP79 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
VTA1Q9NP79 MIR6073-201ENST00000352083 89 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 RNU1-96P-201ENST00000364163 162 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 Y_RNA.217-201ENST00000364214 105 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 RNU6-407P-201ENST00000365280 104 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 Y_RNA.341-201ENST00000365341 102 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 Y_RNA.515-201ENST00000384535 112 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 RNA5SP181-201ENST00000410246 98 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 RNA5SP270-201ENST00000411361 118 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.59□□□□□ -1.99
VTA1Q9NP79 HMGN2P34-201ENST00000437647 269 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
VTA1Q9NP79 AL139109.1-201ENST00000455491 297 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 Y_RNA.641-201ENST00000459414 105 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 MTND1P19-201ENST00000511780 315 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.59□□□□□ -1.99
VTA1Q9NP79 RNU6-237P-201ENST00000515985 71 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 RNA5SP402-201ENST00000517148 110 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 MIR4438-201ENST00000585271 93 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.59□□□□□ -1.99
VTA1Q9NP79 MIR338-201ENST00000636369 67 ntBASIC2.59□□□□□ -1.99
VTA1Q9NP79 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VTA1Q9NP79 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.59□□□□□ -2
VTA1Q9NP79 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
VTA1Q9NP79 SNORD114-1-201ENST00000362705 72 ntBASIC2.58□□□□□ -2
VTA1Q9NP79 Y_RNA.54-201ENST00000362766 105 ntBASIC2.58□□□□□ -2
VTA1Q9NP79 RNY1-201ENST00000364228 113 ntBASIC2.58□□□□□ -2
VTA1Q9NP79 MIR562-201ENST00000384894 95 ntBASIC2.58□□□□□ -2
VTA1Q9NP79 RNU6-855P-201ENST00000410395 104 ntBASIC2.58□□□□□ -2
VTA1Q9NP79 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.58□□□□□ -2
VTA1Q9NP79 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.58□□□□□ -2
VTA1Q9NP79 Y_RNA.673-201ENST00000516306 88 ntBASIC2.58□□□□□ -2
VTA1Q9NP79 RPL21P9-201ENST00000556149 474 ntBASIC2.58□□□□□ -2
VTA1Q9NP79 MIR3145-201ENST00000580727 82 ntBASIC2.58□□□□□ -2
VTA1Q9NP79 MIR4524B-201ENST00000581569 115 ntBASIC2.58□□□□□ -2
VTA1Q9NP79 MIR4282-201ENST00000583613 67 ntBASIC2.58□□□□□ -2
VTA1Q9NP79 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.58□□□□□ -2
VTA1Q9NP79 AL359075.3-201ENST00000613288 217 ntBASIC2.58□□□□□ -2
VTA1Q9NP79 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.58□□□□□ -2
VTA1Q9NP79 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.58□□□□□ -2
VTA1Q9NP79 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VTA1Q9NP79 Y_RNA.60-201ENST00000362831 98 ntBASIC2.57□□□□□ -2
VTA1Q9NP79 RNU1-22P-201ENST00000363334 158 ntBASIC2.57□□□□□ -2
VTA1Q9NP79 Y_RNA.310-201ENST00000365063 113 ntBASIC2.57□□□□□ -2
VTA1Q9NP79 HMGN2P39-201ENST00000398005 273 ntBASIC2.57□□□□□ -2
VTA1Q9NP79 RPS15AP28-201ENST00000435088 386 ntBASIC2.57□□□□□ -2
VTA1Q9NP79 U8.19-201ENST00000459095 133 ntBASIC2.57□□□□□ -2
VTA1Q9NP79 COX6CP14-201ENST00000469580 174 ntBASIC2.57□□□□□ -2
VTA1Q9NP79 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.57□□□□□ -2
VTA1Q9NP79 AC097462.1-201ENST00000514125 324 ntBASIC2.57□□□□□ -2
VTA1Q9NP79 RNU7-99P-201ENST00000516271 62 ntBASIC2.57□□□□□ -2
VTA1Q9NP79 RNU7-116P-201ENST00000516940 62 ntBASIC2.57□□□□□ -2
VTA1Q9NP79 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.57□□□□□ -2
VTA1Q9NP79 AC005357.1-201ENST00000588399 301 ntBASIC2.57□□□□□ -2
VTA1Q9NP79 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.57□□□□□ -2
VTA1Q9NP79 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms