Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC091152.2-201ENST00000591628 2569 ntBASIC3.08□□□□□ -1.92
SSU72Q9NP77 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.08□□□□□ -1.92
SSU72Q9NP77 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSU72Q9NP77 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSU72Q9NP77 AL359837.1-201ENST00000381357 287 ntBASIC3.08□□□□□ -1.92
SSU72Q9NP77 SNORA1-201ENST00000384107 130 ntBASIC3.08□□□□□ -1.92
SSU72Q9NP77 SNORA5A-201ENST00000384111 134 ntBASIC3.08□□□□□ -1.92
SSU72Q9NP77 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SSU72Q9NP77 AL670379.3-201ENST00000605040 251 ntBASIC3.08□□□□□ -1.92
SSU72Q9NP77 XIST_intron.1-201ENST00000619444 68 ntBASIC3.08□□□□□ -1.92
SSU72Q9NP77 MIR5739-201ENST00000619803 80 ntBASIC3.08□□□□□ -1.92
SSU72Q9NP77 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSU72Q9NP77 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSU72Q9NP77 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SSU72Q9NP77 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.07□□□□□ -1.92
SSU72Q9NP77 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSU72Q9NP77 Y_RNA.35-201ENST00000362601 101 ntBASIC3.07□□□□□ -1.92
SSU72Q9NP77 MIR181B1-201ENST00000385240 110 ntBASIC3.07□□□□□ -1.92
SSU72Q9NP77 FO393413.1-201ENST00000402892 195 ntBASIC3.07□□□□□ -1.92
SSU72Q9NP77 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.07□□□□□ -1.92
SSU72Q9NP77 HMGN2P34-201ENST00000437647 269 ntBASIC3.07□□□□□ -1.92
SSU72Q9NP77 RPS29P6-201ENST00000438196 145 ntBASIC3.07□□□□□ -1.92
SSU72Q9NP77 AC023449.1-201ENST00000454464 154 ntBASIC3.07□□□□□ -1.92
SSU72Q9NP77 RN7SKP21-201ENST00000516503 220 ntBASIC3.07□□□□□ -1.92
SSU72Q9NP77 AC073413.2-201ENST00000604332 360 ntBASIC3.07□□□□□ -1.92
SSU72Q9NP77 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.07□□□□□ -1.92
SSU72Q9NP77 U6.108-201ENST00000637764 58 ntBASIC3.07□□□□□ -1.92
SSU72Q9NP77 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.07□□□□□ -1.92
SSU72Q9NP77 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSU72Q9NP77 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SSU72Q9NP77 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.06□□□□□ -1.92
SSU72Q9NP77 SNORA26-201ENST00000391286 122 ntBASIC3.06□□□□□ -1.92
SSU72Q9NP77 SNORD88.1-201ENST00000408684 91 ntBASIC3.06□□□□□ -1.92
SSU72Q9NP77 AC018634.1-201ENST00000437554 401 ntBASIC3.06□□□□□ -1.92
SSU72Q9NP77 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.06□□□□□ -1.92
SSU72Q9NP77 RN7SKP19-201ENST00000516016 252 ntBASIC3.06□□□□□ -1.92
SSU72Q9NP77 MIR4679-2-201ENST00000578358 77 ntBASIC3.06□□□□□ -1.92
SSU72Q9NP77 AL022345.2-201ENST00000606307 135 ntBASIC3.06□□□□□ -1.92
SSU72Q9NP77 AL121772.2-201ENST00000614331 297 ntBASIC3.06□□□□□ -1.92
SSU72Q9NP77 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SSU72Q9NP77 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SSU72Q9NP77 AC073325.2-201ENST00000339545 159 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 Y_RNA.43-201ENST00000362670 111 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 RNU6-647P-201ENST00000364243 107 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 SNORD18B-201ENST00000365659 72 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 RNA5SP127-201ENST00000411051 133 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 AC018868.1-201ENST00000491307 315 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 MRPS17P9-201ENST00000511924 393 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 SNORA4.4-201ENST00000515921 135 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 RNA5SP236-201ENST00000516169 116 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 SNORA18.4-201ENST00000516440 124 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 SNORA48.11-201ENST00000517015 89 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 RNU6-365P-201ENST00000517113 106 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 RNU1-104P-201ENST00000517280 175 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.05□□□□□ -1.92
SSU72Q9NP77 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.05□□□□□ -1.92
SSU72Q9NP77 MIR4662B-201ENST00000579498 81 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 AL356280.1-201ENST00000603614 379 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 AC004832.5-201ENST00000608677 401 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 MIR8058-201ENST00000615737 89 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 MIR622-201ENST00000638396 96 ntBASIC3.05□□□□□ -1.92
SSU72Q9NP77 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SSU72Q9NP77 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSU72Q9NP77 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSU72Q9NP77 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSU72Q9NP77 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SSU72Q9NP77 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSU72Q9NP77 RNA5SP139-201ENST00000364340 117 ntBASIC3.04□□□□□ -1.92
SSU72Q9NP77 SNORD116-21-201ENST00000384507 92 ntBASIC3.04□□□□□ -1.92
SSU72Q9NP77 MIR591-201ENST00000385290 95 ntBASIC3.04□□□□□ -1.92
SSU72Q9NP77 SNORD72-201ENST00000390994 80 ntBASIC3.04□□□□□ -1.92
SSU72Q9NP77 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.04□□□□□ -1.92
SSU72Q9NP77 AL590004.2-201ENST00000404787 371 ntBASIC3.04□□□□□ -1.92
SSU72Q9NP77 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.04□□□□□ -1.92
SSU72Q9NP77 AC004975.1-201ENST00000428733 208 ntBASIC3.04□□□□□ -1.92
SSU72Q9NP77 AC011406.1-201ENST00000512440 370 ntBASIC3.04□□□□□ -1.92
SSU72Q9NP77 RNU7-99P-201ENST00000516271 62 ntBASIC3.04□□□□□ -1.92
SSU72Q9NP77 RNA5SP170-201ENST00000517150 101 ntBASIC3.04□□□□□ -1.92
SSU72Q9NP77 MIR3129-201ENST00000581095 76 ntBASIC3.04□□□□□ -1.92
SSU72Q9NP77 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
SSU72Q9NP77 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
SSU72Q9NP77 snoU2-30.2-201ENST00000362805 70 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 RNA5SP387-201ENST00000364226 106 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 Y_RNA.253-201ENST00000364562 112 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 SNORA7.4-201ENST00000384249 137 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 SNORD61-201ENST00000384252 73 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 MIR592-201ENST00000384959 97 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 MIR218-2-201ENST00000385006 110 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 MIR520G-201ENST00000385064 90 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 RNU1-101P-201ENST00000391171 127 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 RNA5SP467-201ENST00000391274 118 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 MIR1253-201ENST00000408273 105 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 RNU6-1186P-201ENST00000410429 97 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 RPS29P21-201ENST00000496272 170 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.03□□□□□ -1.92
SSU72Q9NP77 SEM1P1-201ENST00000506694 209 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.03□□□□□ -1.92
SSU72Q9NP77 AC007536.1-201ENST00000533382 349 ntBASIC3.03□□□□□ -1.92
SSU72Q9NP77 NDUFA5P6-201ENST00000542110 379 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms