Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RNU6-950P-201ENST00000384651 107 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 MT-TL1-201ENST00000386347 75 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 RNU6-876P-201ENST00000391295 104 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 Y_RNA.599-201ENST00000410489 109 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.89□□□□□ -2.27
HMG20AQ9NP66 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 SNORA40.9-201ENST00000515895 93 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 RNA5SP20-201ENST00000515976 84 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 RNA5SP458-201ENST00000516188 119 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 RNU6-1291P-201ENST00000516591 104 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 RNU6-63P-201ENST00000516690 95 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 RNU6-922P-201ENST00000516753 99 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 RN7SKP88-201ENST00000516847 250 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.89□□□□□ -2.27
HMG20AQ9NP66 AC055872.1-201ENST00000570978 278 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 7SK.8-201ENST00000612110 250 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 7SK.11-201ENST00000615477 250 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 AC073349.3-201ENST00000617616 186 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.89□□□□□ -2.27
HMG20AQ9NP66 7SK.13-201ENST00000622040 250 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 U6.115-201ENST00000636045 103 ntBASIC0.89□□□□□ -2.27
HMG20AQ9NP66 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HMG20AQ9NP66 SNORA1B-201ENST00000362535 133 ntBASIC0.88□□□□□ -2.27
HMG20AQ9NP66 U8.16-201ENST00000391279 133 ntBASIC0.88□□□□□ -2.27
HMG20AQ9NP66 AL034345.1-201ENST00000407768 123 ntBASIC0.88□□□□□ -2.27
HMG20AQ9NP66 Y_RNA.646-201ENST00000410980 101 ntBASIC0.88□□□□□ -2.27
HMG20AQ9NP66 RAB28P5-201ENST00000427490 651 ntBASIC0.88□□□□□ -2.27
HMG20AQ9NP66 AC093850.1-201ENST00000454121 251 ntBASIC0.88□□□□□ -2.27
HMG20AQ9NP66 RNU6-625P-201ENST00000459412 107 ntBASIC0.88□□□□□ -2.27
HMG20AQ9NP66 RPL17P19-201ENST00000489069 552 ntBASIC0.88□□□□□ -2.27
HMG20AQ9NP66 AC116353.2-201ENST00000505332 712 ntBASIC0.88□□□□□ -2.27
HMG20AQ9NP66 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.88□□□□□ -2.27
HMG20AQ9NP66 RNA5SP168-201ENST00000516642 112 ntBASIC0.88□□□□□ -2.27
HMG20AQ9NP66 RN7SKP49-201ENST00000516675 260 ntBASIC0.88□□□□□ -2.27
HMG20AQ9NP66 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.88□□□□□ -2.27
HMG20AQ9NP66 SNORD114-21-201ENST00000606412 72 ntBASIC0.88□□□□□ -2.27
HMG20AQ9NP66 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.88□□□□□ -2.27
HMG20AQ9NP66 RNU6-1301P-201ENST00000362724 104 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 SNORD81.2-201ENST00000365153 76 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 RNU6-926P-201ENST00000384075 107 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 RNU6-310P-201ENST00000384655 107 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 MIR660-201ENST00000385235 97 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 SNORD12B-201ENST00000410433 91 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 RNU6-370P-201ENST00000411008 104 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 MTCO3P19-201ENST00000415864 321 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.87□□□□□ -2.27
HMG20AQ9NP66 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.87□□□□□ -2.27
HMG20AQ9NP66 RPL30P15-201ENST00000457129 321 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 MIR2053-201ENST00000459295 91 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 RPL39P38-201ENST00000467018 153 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 AC087343.1-201ENST00000477341 475 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.87□□□□□ -2.27
HMG20AQ9NP66 OR9P1P-201ENST00000496431 281 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.87□□□□□ -2.27
HMG20AQ9NP66 AC091178.2-201ENST00000584401 117 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 AC092794.1-201ENST00000612734 582 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 AC087588.2-201ENST00000617667 426 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 AC006435.5-201ENST00000624486 112 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 MIR3674-201ENST00000636576 68 ntBASIC0.87□□□□□ -2.27
HMG20AQ9NP66 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
HMG20AQ9NP66 RNU6-961P-201ENST00000363893 105 ntBASIC0.86□□□□□ -2.27
HMG20AQ9NP66 Y_RNA.265-201ENST00000364677 108 ntBASIC0.86□□□□□ -2.27
HMG20AQ9NP66 RNU6-376P-201ENST00000384731 106 ntBASIC0.86□□□□□ -2.27
HMG20AQ9NP66 MTND1P2-201ENST00000430604 821 ntBASIC0.86□□□□□ -2.27
HMG20AQ9NP66 AL137792.2-201ENST00000443484 235 ntBASIC0.86□□□□□ -2.27
HMG20AQ9NP66 RNU7-94P-201ENST00000459576 63 ntBASIC0.86□□□□□ -2.27
HMG20AQ9NP66 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.86□□□□□ -2.27
HMG20AQ9NP66 AC105758.1-201ENST00000506038 399 ntBASIC0.86□□□□□ -2.27
HMG20AQ9NP66 AC074133.1-201ENST00000515696 183 ntBASIC0.86□□□□□ -2.27
HMG20AQ9NP66 RNU6-917P-201ENST00000516294 104 ntBASIC0.86□□□□□ -2.27
HMG20AQ9NP66 RNU7-40P-201ENST00000516397 64 ntBASIC0.86□□□□□ -2.27
HMG20AQ9NP66 Y_RNA.691-201ENST00000516611 103 ntBASIC0.86□□□□□ -2.27
HMG20AQ9NP66 RNU6-1116P-201ENST00000517269 99 ntBASIC0.86□□□□□ -2.27
HMG20AQ9NP66 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.86□□□□□ -2.27
HMG20AQ9NP66 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.86□□□□□ -2.27
HMG20AQ9NP66 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.86□□□□□ -2.27
HMG20AQ9NP66 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.86□□□□□ -2.27
HMG20AQ9NP66 MIR8065-201ENST00000620577 100 ntBASIC0.86□□□□□ -2.27
HMG20AQ9NP66 AL513423.1-201ENST00000621695 132 ntBASIC0.86□□□□□ -2.27
HMG20AQ9NP66 TPTEP1-208ENST00000636884 213 ntBASIC0.86□□□□□ -2.27
HMG20AQ9NP66 RNU4-76P-201ENST00000364509 141 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 RNU6-117P-201ENST00000365415 107 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 RNU6-424P-201ENST00000384367 105 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 SNORD41-201ENST00000386967 70 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 MTCYBP4-201ENST00000401524 249 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 RNA5SP475-201ENST00000410568 110 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 AC114482.1-201ENST00000418010 247 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 AC233266.1-201ENST00000454518 96 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 AL163540.1-201ENST00000485382 386 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 AC022493.2-201ENST00000506122 481 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 RNU6-408P-201ENST00000515910 100 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 RNU6-237P-201ENST00000515985 71 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 AC023442.1-201ENST00000531247 422 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 RPL21P9-201ENST00000556149 474 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 MIR4769-201ENST00000584126 77 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 AC242852.1-201ENST00000612151 96 ntBASIC0.85□□□□□ -2.27
HMG20AQ9NP66 AC244015.1-201ENST00000622301 99 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms