Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 RNU6-94P-201ENST00000607728 107 ntBASIC0.32□□□□□ -2.36
CDCA4Q9BXL8 SEPT14P17-201ENST00000617978 177 ntBASIC0.32□□□□□ -2.36
CDCA4Q9BXL8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
CDCA4Q9BXL8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 Y_RNA.205-201ENST00000364128 113 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 Y_RNA.231-201ENST00000364358 102 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 RNU4-41P-201ENST00000364426 143 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 RNU6-407P-201ENST00000365280 104 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 RNY1P8-201ENST00000383970 114 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 RNU6-128P-201ENST00000383976 107 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 RNU6-95P-201ENST00000384697 107 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 RNU6-1237P-201ENST00000384777 107 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 MIR891A-201ENST00000401237 79 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 MIR1185-1-201ENST00000408598 86 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 RNU6-648P-201ENST00000410190 107 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 ZNF885P-201ENST00000420174 1098 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 AL590632.1-201ENST00000424289 371 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 PCMTD1P1-201ENST00000455560 355 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 RN7SKP298-201ENST00000515950 94 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 POLR3GP2-201ENST00000588366 668 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 AC120024.3-201ENST00000603167 156 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 AC010999.1-201ENST00000611856 324 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 AC099654.12-201ENST00000639868 649 ntBASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CDCA4Q9BXL8 RNU6-833P-201ENST00000363486 107 ntBASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 RNU5F-3P-201ENST00000363767 117 ntBASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 Y_RNA.372-201ENST00000365599 102 ntBASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 Y_RNA.409-201ENST00000383990 98 ntBASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 MIR517A-201ENST00000385001 87 ntBASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 RNU5A-5P-201ENST00000411054 116 ntBASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 AC244098.3-201ENST00000424803 96 ntBASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 Z98949.2-201ENST00000440996 144 ntBASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 AC093019.1-201ENST00000443135 252 ntBASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 RPS20P10-201ENST00000451209 253 ntBASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 CYCTP-201ENST00000504253 315 ntBASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 RNA5SP20-201ENST00000515976 84 ntBASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 RNU6-835P-201ENST00000516974 104 ntBASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 AC134698.4-201ENST00000523451 826 ntBASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 AC093913.1-201ENST00000614178 329 ntBASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CDCA4Q9BXL8 SNORA27.1-201ENST00000362604 124 ntBASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 RNU6-254P-201ENST00000363377 107 ntBASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 RNU6-1322P-201ENST00000364309 107 ntBASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 RNU1-119P-201ENST00000391122 165 ntBASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 MTCYBP10-201ENST00000424905 650 ntBASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 PIGPP3-201ENST00000425307 415 ntBASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 MTCO1P19-201ENST00000443487 500 ntBASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 RNU6-956P-201ENST00000458868 103 ntBASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 RNU7-41P-201ENST00000515917 61 ntBASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 RN7SKP164-201ENST00000516138 266 ntBASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 RNU6-1110P-201ENST00000516462 101 ntBASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 Y_RNA.683-201ENST00000516508 93 ntBASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 AC011195.1-201ENST00000578177 177 ntBASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 RNU6-89P-201ENST00000606519 100 ntBASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 MIR6516-201ENST00000630554 81 ntBASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CDCA4Q9BXL8 RNU6-1252P-201ENST00000363054 104 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 MIR452-201ENST00000385020 85 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 RNA5SP511-201ENST00000410487 115 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 AC243428.1-201ENST00000421099 264 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 AL137792.2-201ENST00000443484 235 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 MTND1P11-201ENST00000456661 876 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 AC046134.1-201ENST00000514454 666 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 SNORA68.3-201ENST00000515906 83 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 ACA59.1-201ENST00000515966 143 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 RNU6-1278P-201ENST00000516130 107 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 Y_RNA.665-201ENST00000516177 98 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 RNU6-1096P-201ENST00000517089 102 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 LRRC34P1-201ENST00000542742 915 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 MIR1273G-201ENST00000577677 100 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 Z69908.1-201ENST00000622603 247 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 AC008133.2-201ENST00000624540 351 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 AC100810.6-201ENST00000638068 285 ntBASIC0.28□□□□□ -2.36
CDCA4Q9BXL8 AC134026.1-201ENST00000623249 2239 ntBASIC0.28□□□□□ -2.37
CDCA4Q9BXL8 RNU6-222P-201ENST00000362438 107 ntBASIC0.27□□□□□ -2.37
CDCA4Q9BXL8 RNU6-117P-201ENST00000365415 107 ntBASIC0.27□□□□□ -2.37
CDCA4Q9BXL8 SNORA36.2-201ENST00000384004 127 ntBASIC0.27□□□□□ -2.37
CDCA4Q9BXL8 RNU6-994P-201ENST00000410507 111 ntBASIC0.27□□□□□ -2.37
CDCA4Q9BXL8 RNA5SP222-201ENST00000411039 105 ntBASIC0.27□□□□□ -2.37
CDCA4Q9BXL8 AC092447.3-201ENST00000426027 686 ntBASIC0.27□□□□□ -2.37
CDCA4Q9BXL8 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.27□□□□□ -2.37
CDCA4Q9BXL8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.27□□□□□ -2.37
CDCA4Q9BXL8 PCNPP5-201ENST00000452246 481 ntBASIC0.27□□□□□ -2.37
CDCA4Q9BXL8 AC067940.1-201ENST00000458411 300 ntBASIC0.27□□□□□ -2.37
CDCA4Q9BXL8 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.27□□□□□ -2.37
CDCA4Q9BXL8 AC145350.1-201ENST00000567426 208 ntBASIC0.27□□□□□ -2.37
CDCA4Q9BXL8 RNA5SP48-201ENST00000363969 126 ntBASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 RNU6-1264P-201ENST00000383891 107 ntBASIC0.26□□□□□ -2.37
CDCA4Q9BXL8 RNU6-1067P-201ENST00000384752 107 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms