Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 HSPE1P13-201ENST00000451143 297 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 AL137159.1-201ENST00000452808 512 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 RNU6-498P-201ENST00000459468 107 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 AC117454.1-201ENST00000491120 168 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.6□□□□□ -1.99
NDC1Q9BTX1 SCARNA8-201ENST00000515924 131 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 RNA5SP76-201ENST00000516277 87 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 RNU6-453P-201ENST00000516819 85 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.6□□□□□ -1.99
NDC1Q9BTX1 MIR3605-201ENST00000583214 100 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 AC013412.1-201ENST00000610687 192 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 MIR6733-201ENST00000635723 61 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 AC068647.2-201ENST00000637380 353 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NDC1Q9BTX1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
NDC1Q9BTX1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.6□□□□□ -1.99
NDC1Q9BTX1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NDC1Q9BTX1 RNU6-271P-201ENST00000363858 105 ntBASIC2.59□□□□□ -1.99
NDC1Q9BTX1 RNU1-112P-201ENST00000364401 164 ntBASIC2.59□□□□□ -1.99
NDC1Q9BTX1 RNU6-407P-201ENST00000365280 104 ntBASIC2.59□□□□□ -1.99
NDC1Q9BTX1 SNORD116-13-201ENST00000384408 92 ntBASIC2.59□□□□□ -1.99
NDC1Q9BTX1 MIR526A2-201ENST00000390198 65 ntBASIC2.59□□□□□ -1.99
NDC1Q9BTX1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.59□□□□□ -1.99
NDC1Q9BTX1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.59□□□□□ -1.99
NDC1Q9BTX1 AC003982.1-202ENST00000469928 248 ntBASIC2.59□□□□□ -1.99
NDC1Q9BTX1 AC005840.1-201ENST00000498412 377 ntBASIC2.59□□□□□ -1.99
NDC1Q9BTX1 AC093259.1-201ENST00000509755 300 ntBASIC2.59□□□□□ -1.99
NDC1Q9BTX1 SNORA9.3-201ENST00000516383 129 ntBASIC2.59□□□□□ -1.99
NDC1Q9BTX1 RNU7-115P-201ENST00000516433 55 ntBASIC2.59□□□□□ -1.99
NDC1Q9BTX1 AC025647.1-201ENST00000517879 253 ntBASIC2.59□□□□□ -1.99
NDC1Q9BTX1 PRELID2P1-201ENST00000552837 301 ntBASIC2.59□□□□□ -1.99
NDC1Q9BTX1 AC090616.3-201ENST00000582184 217 ntBASIC2.59□□□□□ -1.99
NDC1Q9BTX1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.59□□□□□ -1.99
NDC1Q9BTX1 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.58□□□□□ -2
NDC1Q9BTX1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.58□□□□□ -2
NDC1Q9BTX1 RNU4-82P-201ENST00000362443 140 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 SNORD113-1-201ENST00000365321 69 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 MIR518C-201ENST00000384822 101 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 RNU2-52P-201ENST00000410680 190 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 RNU2-48P-201ENST00000410694 191 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 EBAG9P1-201ENST00000418955 543 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 AC123900.1-201ENST00000420390 96 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 AC008134.1-201ENST00000420943 193 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 RPS26P55-201ENST00000471178 356 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 AC096725.1-201ENST00000514266 313 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 RNU6-991P-201ENST00000516168 107 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 MIR4435-1-201ENST00000582552 80 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 MIR3124-201ENST00000582636 67 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 AP001485.1-201ENST00000604799 199 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 MIR548AY-201ENST00000617669 107 ntBASIC2.58□□□□□ -2
NDC1Q9BTX1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NDC1Q9BTX1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NDC1Q9BTX1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
NDC1Q9BTX1 AL356292.1-201ENST00000283110 373 ntBASIC2.57□□□□□ -2
NDC1Q9BTX1 RNU6-1180P-201ENST00000364935 107 ntBASIC2.57□□□□□ -2
NDC1Q9BTX1 Y_RNA.332-201ENST00000365271 113 ntBASIC2.57□□□□□ -2
NDC1Q9BTX1 RNU6-144P-201ENST00000383951 107 ntBASIC2.57□□□□□ -2
NDC1Q9BTX1 MIR616-201ENST00000385293 97 ntBASIC2.57□□□□□ -2
NDC1Q9BTX1 MIR548I2-201ENST00000408348 149 ntBASIC2.57□□□□□ -2
NDC1Q9BTX1 AC092427.1-202ENST00000430569 476 ntBASIC2.57□□□□□ -2
NDC1Q9BTX1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.57□□□□□ -2
NDC1Q9BTX1 CR769767.1-201ENST00000436337 346 ntBASIC2.57□□□□□ -2
NDC1Q9BTX1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.57□□□□□ -2
NDC1Q9BTX1 AC245047.8-201ENST00000456455 284 ntBASIC2.57□□□□□ -2
NDC1Q9BTX1 RNA5SP20-201ENST00000515976 84 ntBASIC2.57□□□□□ -2
NDC1Q9BTX1 RNU6-1007P-201ENST00000516586 107 ntBASIC2.57□□□□□ -2
NDC1Q9BTX1 RNU6-667P-201ENST00000517186 102 ntBASIC2.57□□□□□ -2
NDC1Q9BTX1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.57□□□□□ -2
NDC1Q9BTX1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.57□□□□□ -2
NDC1Q9BTX1 AL159152.1-201ENST00000635019 2587 ntBASIC2.57□□□□□ -2
NDC1Q9BTX1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.57□□□□□ -2
NDC1Q9BTX1 RNU6-818P-201ENST00000364837 108 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 Y_RNA.400-201ENST00000383963 111 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 MT-TT-201ENST00000387460 66 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 RNU6-239P-201ENST00000390990 99 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 SNORA36B-201ENST00000410438 131 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 RNU6-383P-201ENST00000410864 94 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 AC016909.1-201ENST00000415916 166 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 RPL39P40-201ENST00000445481 146 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 AL357134.1-201ENST00000445848 426 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 AC010531.2-201ENST00000465012 153 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 RN7SL499P-201ENST00000481141 276 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 RN7SL297P-201ENST00000483161 293 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 AC018868.1-201ENST00000491307 315 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 SNORA4.4-201ENST00000515921 135 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 RNU6-63P-201ENST00000516690 95 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 AC109810.1-201ENST00000534066 224 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 MIR4724-201ENST00000579485 89 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 MIR4431-201ENST00000579990 94 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 MIR5688-201ENST00000580619 83 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 AL355596.1-201ENST00000565399 3996 ntBASIC2.56□□□□□ -2
NDC1Q9BTX1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.56□□□□□ -2
NDC1Q9BTX1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.55□□□□□ -2
NDC1Q9BTX1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.55□□□□□ -2
NDC1Q9BTX1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NDC1Q9BTX1 Y_RNA.229-201ENST00000364347 113 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 RNU6-1240P-201ENST00000365155 104 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 SNORA25B-201ENST00000365507 128 ntBASIC2.55□□□□□ -2
NDC1Q9BTX1 MIR592-201ENST00000384959 97 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms