Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 U3.8-201ENST00000363675 217 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 SNORA51.4-201ENST00000364993 124 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 RNU6-449P-201ENST00000383914 107 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.412-201ENST00000384001 104 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 RNU6-959P-201ENST00000384671 107 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 RNU6-131P-201ENST00000391144 107 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 MIR1283-1-201ENST00000408494 87 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 RNU2-2P-201ENST00000410396 191 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 AC244505.4-201ENST00000434905 287 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 SSXP5-201ENST00000443473 287 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 AL137159.1-201ENST00000452808 512 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.637-201ENST00000459424 114 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 AC021205.2-201ENST00000480069 347 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 RN7SL636P-201ENST00000497504 294 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 AC026271.5-201ENST00000577873 130 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 RNU2-4P-201ENST00000606190 192 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 U2.15-201ENST00000611544 191 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 U2.16-201ENST00000613119 191 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 U2.12-201ENST00000613778 191 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 U2.9-201ENST00000615427 191 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 U2.11-201ENST00000616345 191 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 MIR8070-201ENST00000616510 88 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 U2.2-201ENST00000616535 191 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 U2.3-201ENST00000617785 191 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 U2.19-201ENST00000618602 191 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 RNU2-1-201ENST00000618664 191 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 U2.6-201ENST00000619225 191 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 U2.5-201ENST00000619465 191 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 U2.10-201ENST00000620268 191 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 MIR1248-201ENST00000629190 106 ntBASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.71□□□□□ -1.98
LRFN3Q9BTN0 AL356292.1-201ENST00000283110 373 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 SNORD50B-201ENST00000364995 70 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.329-201ENST00000365209 107 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.343-201ENST00000365354 112 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 U8.9-201ENST00000365667 134 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.400-201ENST00000383963 111 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 RNU6-22P-201ENST00000384355 107 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.497-201ENST00000384447 98 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 SNORA64-201ENST00000384674 134 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 SNORA40.19-201ENST00000390846 128 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 RNU6-1248P-201ENST00000391096 64 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 RNA5SP475-201ENST00000410568 110 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 RNU2-51P-201ENST00000410708 197 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 EDDM3CP-201ENST00000415977 425 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 HMGN2P18-201ENST00000450680 270 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 RNU1-117P-201ENST00000517041 158 ntBASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LRFN3Q9BTN0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.23-201ENST00000362496 106 ntBASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.121-201ENST00000363309 113 ntBASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 RNU6-1305P-201ENST00000364353 104 ntBASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 RNU6-312P-201ENST00000364629 107 ntBASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 RNU4-17P-201ENST00000365598 141 ntBASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.568-201ENST00000384742 113 ntBASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 AL162725.1-201ENST00000435405 301 ntBASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 SRIP1-201ENST00000489235 288 ntBASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 AC018868.1-201ENST00000491307 315 ntBASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 RNU6-436P-201ENST00000516171 114 ntBASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 RNA5SP320-201ENST00000516263 124 ntBASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 RNU2-34P-201ENST00000516534 121 ntBASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 RNU2-12P-201ENST00000517216 168 ntBASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 U4.3-201ENST00000621047 82 ntBASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LRFN3Q9BTN0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.75-201ENST00000362927 97 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.182-201ENST00000363880 111 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 RNU6-743P-201ENST00000364151 106 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 RNU4-84P-201ENST00000364200 139 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 RNU6-454P-201ENST00000364292 107 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 RNU6-818P-201ENST00000364837 108 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.415-201ENST00000384012 112 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.488-201ENST00000384403 102 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 RNU6-763P-201ENST00000390865 106 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 U3.40-201ENST00000408706 208 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 RNU2-48P-201ENST00000410694 191 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 AC004866.1-201ENST00000411748 78 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 SEPT7P4-201ENST00000437076 306 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 AC016925.1-201ENST00000458303 298 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 U8.19-201ENST00000459095 133 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 AC245166.1-201ENST00000521012 253 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 CYCSP26-201ENST00000534107 320 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 AC009127.3-201ENST00000570531 403 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 AC091895.1-201ENST00000624494 256 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms