Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 MIR548K-201ENST00000408406 116 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 RN7SKP200-201ENST00000410564 320 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 USMG5P1-201ENST00000425964 177 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 USP9YP16-201ENST00000430287 407 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 USP9YP23-201ENST00000455085 407 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 RPL39P38-201ENST00000467018 153 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 AC092991.1-201ENST00000477176 376 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 AC069439.1-201ENST00000494739 167 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 AC046134.1-201ENST00000514454 666 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-718P-201ENST00000516166 105 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 AC105029.1-201ENST00000520250 669 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 AC023157.2-201ENST00000540596 141 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 MIR4438-201ENST00000585271 93 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 AC068790.6-201ENST00000602558 258 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 7SK.7-201ENST00000603504 247 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 AC100812.1-201ENST00000607622 580 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 RMST_2.1-201ENST00000617263 136 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 AC006435.5-201ENST00000624486 112 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 AC068137.4-201ENST00000638485 296 ntBASIC0.81□□□□□ -2.28
RHOXF2Q9BQY4 AC018630.2-201ENST00000534866 2403 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-1266P-201ENST00000362794 105 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.86-201ENST00000363020 111 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.339-201ENST00000365325 102 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 SNORA20B-201ENST00000384220 132 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-1145P-201ENST00000384246 107 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.594-201ENST00000410373 140 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 AC063976.4-201ENST00000421971 163 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 U8.22-201ENST00000459141 133 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 AC010469.2-201ENST00000496412 480 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 AC010598.1-201ENST00000510378 103 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 SNORA31.4-201ENST00000516049 129 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.670-201ENST00000516255 105 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 RNA5SP168-201ENST00000516642 112 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.706-201ENST00000516933 99 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 AC136628.3-201ENST00000521868 290 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 AP002001.1-203ENST00000534002 267 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 AL121579.1-201ENST00000555129 305 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 AC007014.2-201ENST00000615581 479 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 AC002553.4-201ENST00000616896 331 ntBASIC0.8□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-505P-201ENST00000384427 107 ntBASIC0.79□□□□□ -2.28
RHOXF2Q9BQY4 MIR608-201ENST00000384820 100 ntBASIC0.79□□□□□ -2.28
RHOXF2Q9BQY4 MIR190B-201ENST00000401119 79 ntBASIC0.79□□□□□ -2.28
RHOXF2Q9BQY4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.79□□□□□ -2.28
RHOXF2Q9BQY4 MIR1277-201ENST00000408536 78 ntBASIC0.79□□□□□ -2.28
RHOXF2Q9BQY4 AC114482.1-201ENST00000418010 247 ntBASIC0.79□□□□□ -2.28
RHOXF2Q9BQY4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.79□□□□□ -2.28
RHOXF2Q9BQY4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.79□□□□□ -2.28
RHOXF2Q9BQY4 AC097462.1-201ENST00000514125 324 ntBASIC0.79□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.655-201ENST00000515919 96 ntBASIC0.79□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-1016P-201ENST00000516689 94 ntBASIC0.79□□□□□ -2.28
RHOXF2Q9BQY4 AC027419.1-201ENST00000522976 328 ntBASIC0.79□□□□□ -2.28
RHOXF2Q9BQY4 APOOP3-201ENST00000536787 586 ntBASIC0.79□□□□□ -2.28
RHOXF2Q9BQY4 AC090617.3-201ENST00000573670 475 ntBASIC0.79□□□□□ -2.28
RHOXF2Q9BQY4 AL513423.1-201ENST00000621695 132 ntBASIC0.79□□□□□ -2.28
RHOXF2Q9BQY4 RNA5SP361-201ENST00000362686 118 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 RNU4-79P-201ENST00000362764 141 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.364-201ENST00000365532 101 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 Y_RNA.557-201ENST00000384680 107 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 MIR660-201ENST00000385235 97 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 MIR548F5-201ENST00000408421 86 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 MIR548J-201ENST00000408833 112 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 AL139396.1-201ENST00000421137 167 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 MTND5P15-201ENST00000434246 349 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 RPS3AP52-201ENST00000435639 297 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 RPS27P22-201ENST00000478056 241 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 AC018710.1-201ENST00000506509 158 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 RNU6-107P-201ENST00000516643 102 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 AF235103.2-201ENST00000525753 346 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 AC091178.2-201ENST00000584401 117 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 AC093913.1-201ENST00000614178 329 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 AC073349.3-201ENST00000617616 186 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 MIR6079-201ENST00000635807 62 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
RHOXF2Q9BQY4 MIR410-201ENST00000362222 80 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 Y_RNA.6-201ENST00000362350 114 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 Y_RNA.124-201ENST00000363339 93 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 RNU6-1264P-201ENST00000383891 107 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 Y_RNA.404-201ENST00000383978 102 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 AL034345.1-201ENST00000407768 123 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 RNU6-1050P-201ENST00000410388 107 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 MTND3P8-201ENST00000412909 339 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 RPS3AP1-201ENST00000413190 320 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 MTCO3P19-201ENST00000415864 321 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 STAG3L5P-204ENST00000443759 179 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 RNU7-94P-201ENST00000459576 63 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 AC048334.1-201ENST00000477975 159 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 MIR151B-201ENST00000584249 96 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 MIR6788-201ENST00000618842 66 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 AC073869.6-201ENST00000640656 341 ntBASIC0.77□□□□□ -2.29
RHOXF2Q9BQY4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.76□□□□□ -2.29
RHOXF2Q9BQY4 SNORA27.1-201ENST00000362604 124 ntBASIC0.76□□□□□ -2.29
RHOXF2Q9BQY4 RNY1P16-201ENST00000363063 111 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms