Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SNORA3.2-201ENST00000408221 125 ntBASIC2.44□□□□□ -2.02
SMOQ99835 MIR548I3-201ENST00000408378 149 ntBASIC2.44□□□□□ -2.02
SMOQ99835 MIR548I1-201ENST00000408810 149 ntBASIC2.44□□□□□ -2.02
SMOQ99835 SRIP3-201ENST00000413200 219 ntBASIC2.44□□□□□ -2.02
SMOQ99835 AC009310.1-201ENST00000414414 451 ntBASIC2.44□□□□□ -2.02
SMOQ99835 AC060773.1-201ENST00000421698 310 ntBASIC2.44□□□□□ -2.02
SMOQ99835 RPS15AP28-201ENST00000435088 386 ntBASIC2.44□□□□□ -2.02
SMOQ99835 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.44□□□□□ -2.02
SMOQ99835 RNU7-26P-201ENST00000458980 63 ntBASIC2.44□□□□□ -2.02
SMOQ99835 Y_RNA.644-201ENST00000459006 113 ntBASIC2.44□□□□□ -2.02
SMOQ99835 RPS26P55-201ENST00000471178 356 ntBASIC2.44□□□□□ -2.02
SMOQ99835 RNA5SP20-201ENST00000515976 84 ntBASIC2.44□□□□□ -2.02
SMOQ99835 Y_RNA.674-201ENST00000516362 113 ntBASIC2.44□□□□□ -2.02
SMOQ99835 RNU6-1337P-201ENST00000516525 95 ntBASIC2.44□□□□□ -2.02
SMOQ99835 AC087441.2-201ENST00000529141 262 ntBASIC2.44□□□□□ -2.02
SMOQ99835 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.44□□□□□ -2.02
SMOQ99835 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.44□□□□□ -2.02
SMOQ99835 AC004792.1-201ENST00000614523 137 ntBASIC2.44□□□□□ -2.02
SMOQ99835 AL078604.3-201ENST00000615580 211 ntBASIC2.44□□□□□ -2.02
SMOQ99835 AL449363.1-201ENST00000617815 186 ntBASIC2.44□□□□□ -2.02
SMOQ99835 AC010297.1-201ENST00000623948 149 ntBASIC2.44□□□□□ -2.02
SMOQ99835 AC064859.1-201ENST00000624741 174 ntBASIC2.44□□□□□ -2.02
SMOQ99835 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.44□□□□□ -2.02
SMOQ99835 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.43□□□□□ -2.02
SMOQ99835 SNORA25.6-201ENST00000364121 118 ntBASIC2.43□□□□□ -2.02
SMOQ99835 SNORD114-6-201ENST00000364393 72 ntBASIC2.43□□□□□ -2.02
SMOQ99835 Y_RNA.304-201ENST00000365011 112 ntBASIC2.43□□□□□ -2.02
SMOQ99835 RNU6-47P-201ENST00000383866 107 ntBASIC2.43□□□□□ -2.02
SMOQ99835 RNU1-138P-201ENST00000384093 164 ntBASIC2.43□□□□□ -2.02
SMOQ99835 PIGPP3-201ENST00000425307 415 ntBASIC2.43□□□□□ -2.02
SMOQ99835 CR769767.1-201ENST00000436337 346 ntBASIC2.43□□□□□ -2.02
SMOQ99835 RPS20P10-201ENST00000451209 253 ntBASIC2.43□□□□□ -2.02
SMOQ99835 AL138752.1-201ENST00000452964 351 ntBASIC2.43□□□□□ -2.02
SMOQ99835 U2.15-201ENST00000611544 191 ntBASIC2.43□□□□□ -2.02
SMOQ99835 U2.16-201ENST00000613119 191 ntBASIC2.43□□□□□ -2.02
SMOQ99835 U2.12-201ENST00000613778 191 ntBASIC2.43□□□□□ -2.02
SMOQ99835 U2.20-201ENST00000613956 192 ntBASIC2.43□□□□□ -2.02
SMOQ99835 U2.9-201ENST00000615427 191 ntBASIC2.43□□□□□ -2.02
SMOQ99835 U2.11-201ENST00000616345 191 ntBASIC2.43□□□□□ -2.02
SMOQ99835 U2.2-201ENST00000616535 191 ntBASIC2.43□□□□□ -2.02
SMOQ99835 U2.3-201ENST00000617785 191 ntBASIC2.43□□□□□ -2.02
SMOQ99835 U2.19-201ENST00000618602 191 ntBASIC2.43□□□□□ -2.02
SMOQ99835 RNU2-1-201ENST00000618664 191 ntBASIC2.43□□□□□ -2.02
SMOQ99835 U2.6-201ENST00000619225 191 ntBASIC2.43□□□□□ -2.02
SMOQ99835 U2.5-201ENST00000619465 191 ntBASIC2.43□□□□□ -2.02
SMOQ99835 U2.10-201ENST00000620268 191 ntBASIC2.43□□□□□ -2.02
SMOQ99835 AL365265.1-201ENST00000621045 234 ntBASIC2.43□□□□□ -2.02
SMOQ99835 MIR7843-201ENST00000622274 79 ntBASIC2.43□□□□□ -2.02
SMOQ99835 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.43□□□□□ -2.02
SMOQ99835 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.43□□□□□ -2.02
SMOQ99835 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
SMOQ99835 AL356292.1-201ENST00000283110 373 ntBASIC2.42□□□□□ -2.02
SMOQ99835 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SMOQ99835 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SMOQ99835 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SMOQ99835 RNU6-653P-201ENST00000363074 106 ntBASIC2.42□□□□□ -2.02
SMOQ99835 Y_RNA.99-201ENST00000363138 105 ntBASIC2.42□□□□□ -2.02
SMOQ99835 RNU6-271P-201ENST00000363858 105 ntBASIC2.42□□□□□ -2.02
SMOQ99835 Y_RNA.308-201ENST00000365043 101 ntBASIC2.42□□□□□ -2.02
SMOQ99835 MTCO2P33-201ENST00000402100 465 ntBASIC2.42□□□□□ -2.02
SMOQ99835 Y_RNA.793-201ENST00000411222 111 ntBASIC2.42□□□□□ -2.02
SMOQ99835 Z98742.3-201ENST00000418637 326 ntBASIC2.42□□□□□ -2.02
SMOQ99835 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.42□□□□□ -2.02
SMOQ99835 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.42□□□□□ -2.02
SMOQ99835 HSPE1P13-201ENST00000451143 297 ntBASIC2.42□□□□□ -2.02
SMOQ99835 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.42□□□□□ -2.02
SMOQ99835 UBL5P3-201ENST00000475112 231 ntBASIC2.42□□□□□ -2.02
SMOQ99835 AC010409.1-201ENST00000487382 476 ntBASIC2.42□□□□□ -2.02
SMOQ99835 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.42□□□□□ -2.02
SMOQ99835 RNU6-63P-201ENST00000516690 95 ntBASIC2.42□□□□□ -2.02
SMOQ99835 RNU6-182P-201ENST00000516970 105 ntBASIC2.42□□□□□ -2.02
SMOQ99835 RNU1-104P-201ENST00000517280 175 ntBASIC2.42□□□□□ -2.02
SMOQ99835 MIR3670-2-201ENST00000582974 65 ntBASIC2.42□□□□□ -2.02
SMOQ99835 MIR3670-1-201ENST00000584160 65 ntBASIC2.42□□□□□ -2.02
SMOQ99835 MIR3670-3-201ENST00000584855 65 ntBASIC2.42□□□□□ -2.02
SMOQ99835 Z83818.1-201ENST00000603584 150 ntBASIC2.42□□□□□ -2.02
SMOQ99835 AL049779.4-201ENST00000604500 156 ntBASIC2.42□□□□□ -2.02
SMOQ99835 MIR3670-4-201ENST00000612260 65 ntBASIC2.42□□□□□ -2.02
SMOQ99835 AC022202.1-201ENST00000613515 211 ntBASIC2.42□□□□□ -2.02
SMOQ99835 AC013791.1-201ENST00000616619 62 ntBASIC2.42□□□□□ -2.02
SMOQ99835 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
SMOQ99835 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SMOQ99835 AL159152.1-201ENST00000635019 2587 ntBASIC2.41□□□□□ -2.02
SMOQ99835 MIR6073-201ENST00000352083 89 ntBASIC2.41□□□□□ -2.02
SMOQ99835 RNU6-923P-201ENST00000364753 107 ntBASIC2.41□□□□□ -2.02
SMOQ99835 Y_RNA.287-201ENST00000364853 94 ntBASIC2.41□□□□□ -2.02
SMOQ99835 RPS27P22-201ENST00000478056 241 ntBASIC2.41□□□□□ -2.02
SMOQ99835 HMGB3P3-201ENST00000510526 400 ntBASIC2.41□□□□□ -2.02
SMOQ99835 AC107393.1-201ENST00000512403 346 ntBASIC2.41□□□□□ -2.02
SMOQ99835 RNU6-826P-201ENST00000516827 104 ntBASIC2.41□□□□□ -2.02
SMOQ99835 AC004486.1-201ENST00000546846 233 ntBASIC2.41□□□□□ -2.02
SMOQ99835 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.41□□□□□ -2.02
SMOQ99835 AC098479.1-201ENST00000609225 154 ntBASIC2.41□□□□□ -2.02
SMOQ99835 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.41□□□□□ -2.02
SMOQ99835 AC006435.5-201ENST00000624486 112 ntBASIC2.41□□□□□ -2.02
SMOQ99835 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SMOQ99835 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SMOQ99835 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.4□□□□□ -2.02
SMOQ99835 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SMOQ99835 ZNF658B-202ENST00000615961 3375 ntBASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms