Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 MIR532-201ENST00000385025 91 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 MIR548B-201ENST00000385247 97 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 RNU6-360P-201ENST00000390944 104 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 RNU6-1093P-201ENST00000391194 107 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 RNU1-78P-201ENST00000391248 165 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 MIR1283-1-201ENST00000408494 87 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.09□□□□□ -2.23
CDX2Q99626 MTCO2P12-201ENST00000427426 682 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 AL137792.2-201ENST00000443484 235 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.09□□□□□ -2.23
CDX2Q99626 MTCO1P29-201ENST00000496868 288 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.09□□□□□ -2.23
CDX2Q99626 AC022493.2-201ENST00000506122 481 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 SCARNA15.1-201ENST00000516384 125 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 RNU2-34P-201ENST00000516534 121 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 Y_RNA.708-201ENST00000516950 96 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 RNU1-54P-201ENST00000517181 120 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.09□□□□□ -2.23
CDX2Q99626 AP003072.1-201ENST00000531740 145 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.09□□□□□ -2.23
CDX2Q99626 AC026470.2-201ENST00000561492 181 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 MIR3171-201ENST00000584270 74 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 AC040896.1-201ENST00000613819 479 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 AC005562.2-201ENST00000618264 111 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 AC090574.1-201ENST00000623186 233 ntBASIC1.09□□□□□ -2.23
CDX2Q99626 AC010615.1-201ENST00000594254 1764 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 BX322639.1-202ENST00000423987 2213 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 RNU6-222P-201ENST00000362438 107 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 RNU6-545P-201ENST00000362681 104 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 Y_RNA.148-201ENST00000363557 117 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 RNU6-1019P-201ENST00000364424 107 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 SNORA22B-201ENST00000383876 138 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 SNORA67.2-201ENST00000384300 149 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 RNU6-784P-201ENST00000384330 106 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 MIR520A-201ENST00000384862 85 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 MIR194-1-201ENST00000384892 85 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 MIR300-201ENST00000401138 83 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 AC113618.1-201ENST00000416747 285 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 AL139396.1-201ENST00000421137 167 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 MTND4P28-201ENST00000426217 387 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 HSPE1P9-201ENST00000440046 311 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 OR2AQ1P-201ENST00000451972 200 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 Y_RNA.639-201ENST00000458981 102 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 Y_RNA.653-201ENST00000459091 95 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 RNU7-169P-201ENST00000459456 61 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 HMGN1P10-201ENST00000474557 553 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 AC099513.1-201ENST00000490423 301 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 RPL23AP75-201ENST00000491601 451 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.08□□□□□ -2.24
CDX2Q99626 RNU6-470P-201ENST00000515954 104 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.08□□□□□ -2.24
CDX2Q99626 MIR5696-201ENST00000578474 85 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 SNORD58B-201ENST00000607313 66 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.08□□□□□ -2.24
CDX2Q99626 MIR8076-201ENST00000611401 83 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 AC087588.2-201ENST00000617667 426 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 AC138305.3-201ENST00000624988 240 ntBASIC1.08□□□□□ -2.24
CDX2Q99626 AC091812.1-201ENST00000432235 1948 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CDX2Q99626 RNU6-271P-201ENST00000363858 105 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 Y_RNA.187-201ENST00000363918 113 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 Y_RNA.197-201ENST00000364004 102 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 RNU4-76P-201ENST00000364509 141 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 Y_RNA.326-201ENST00000365176 113 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 Y_RNA.405-201ENST00000383979 100 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 Y_RNA.451-201ENST00000384200 100 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 Y_RNA.524-201ENST00000384564 100 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 Y_RNA.561-201ENST00000384694 100 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CDX2Q99626 RNU6-1106P-201ENST00000390845 107 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 Y_RNA.645-201ENST00000391229 102 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 SNORA75.6-201ENST00000391318 127 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 CST2P1-201ENST00000425770 87 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 AC009237.7-201ENST00000447357 229 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.07□□□□□ -2.24
CDX2Q99626 snoU13.30-201ENST00000458951 104 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 U8.21-201ENST00000459536 136 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 Y_RNA.711-201ENST00000516993 102 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 UBL5P4-201ENST00000562584 236 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 AC015688.6-201ENST00000577737 104 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 MIR5701-3-201ENST00000578890 82 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 MIR5701-1-201ENST00000585138 82 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 AL355802.3-201ENST00000607571 545 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 TCL6_2.1-201ENST00000615162 119 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 MIR5701-2-201ENST00000615634 82 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 AC091925.1-201ENST00000623204 462 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 AC008873.1-201ENST00000625051 138 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.07□□□□□ -2.24
CDX2Q99626 MIR338-201ENST00000636369 67 ntBASIC1.07□□□□□ -2.24
CDX2Q99626 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
CDX2Q99626 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CDX2Q99626 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CDX2Q99626 RNY1P16-201ENST00000363063 111 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 RNU6-595P-201ENST00000363944 107 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 RNU6-450P-201ENST00000364654 107 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CDX2Q99626 Y_RNA.395-201ENST00000383945 109 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 RNU6-1040P-201ENST00000383974 107 ntBASIC1.06□□□□□ -2.24
CDX2Q99626 RNU6-1227P-201ENST00000383981 107 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms