Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RNU6-222P-201ENST00000362438 107 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 SNORA27.1-201ENST00000362604 124 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 SNORD14.1-201ENST00000365609 90 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 MIR573-201ENST00000384964 99 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 MIR520G-201ENST00000385064 90 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 RNU6-1304P-201ENST00000411374 106 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 MTND4LP16-201ENST00000440828 295 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 MTND1P27-201ENST00000451117 902 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 PCNPP5-201ENST00000452246 481 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 Y_RNA.654-201ENST00000497848 106 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 AC074133.1-201ENST00000515696 183 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 MTCO2P4-201ENST00000517968 247 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.08□□□□□ -2.4
CCL13Q99616 MIR4764-201ENST00000580680 88 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 AC245884.10-201ENST00000597355 337 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 AC104695.3-201ENST00000604052 296 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.08□□□□□ -2.4
CCL13Q99616 MIR103A1-201ENST00000362165 78 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 SNORD113-7-201ENST00000363762 77 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 RNU6-654P-201ENST00000364373 107 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 RNU4-67P-201ENST00000364569 141 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 RNU4-66P-201ENST00000365199 138 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 RNU6-38P-201ENST00000384085 107 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 RNU5A-2P-201ENST00000384337 116 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 MIR516B2-201ENST00000385190 85 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 SNORA26.8-201ENST00000391306 124 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 MTCYBP4-201ENST00000401524 249 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 AL031667.1-201ENST00000440222 725 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 RPS3AP17-201ENST00000472594 777 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.07□□□□□ -2.4
CCL13Q99616 AC026371.1-201ENST00000551867 419 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 MIR1273G-201ENST00000577677 100 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 MIR3684-201ENST00000579779 74 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 AC109347.2-201ENST00000610220 349 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 AC073534.2-201ENST00000620377 381 ntBASIC0.07□□□□□ -2.4
CCL13Q99616 SNORD68-201ENST00000363214 84 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 Y_RNA.381-201ENST00000365666 102 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 RNU6-790P-201ENST00000384479 105 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 SNORA2B-201ENST00000384583 137 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 MIR136-201ENST00000385207 82 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 AC243428.1-201ENST00000421099 264 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 AL358176.2-201ENST00000425769 204 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 AL137792.2-201ENST00000443484 235 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 AL392103.1-201ENST00000447000 198 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 RNU7-187P-201ENST00000458985 68 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.06□□□□□ -2.4
CCL13Q99616 RPL30P10-201ENST00000488148 337 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 MTCO2P30-201ENST00000503662 364 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 RNA5SP401-201ENST00000515920 127 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 RNU7-43P-201ENST00000516554 64 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.06□□□□□ -2.4
CCL13Q99616 AC093027.1-201ENST00000546698 429 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 MIR4431-201ENST00000579990 94 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 AC100812.1-201ENST00000607622 580 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 AC092807.2-201ENST00000609367 243 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 FAM157A-202ENST00000615155 405 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 MIR6718-201ENST00000616153 80 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 AC015726.2-201ENST00000620112 122 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 AC091925.1-201ENST00000623204 462 ntBASIC0.06□□□□□ -2.4
CCL13Q99616 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
CCL13Q99616 EIF4E2P1-201ENST00000393781 255 ntBASIC0.05□□□□□ -2.4
CCL13Q99616 MTCO1P20-201ENST00000425366 358 ntBASIC0.05□□□□□ -2.4
CCL13Q99616 AL606489.2-201ENST00000433886 234 ntBASIC0.05□□□□□ -2.4
CCL13Q99616 MTCO3P10-201ENST00000455912 772 ntBASIC0.05□□□□□ -2.4
CCL13Q99616 SNORA62.5-201ENST00000516634 120 ntBASIC0.05□□□□□ -2.4
CCL13Q99616 AL162730.1-201ENST00000605734 292 ntBASIC0.05□□□□□ -2.4
CCL13Q99616 AC092634.7-201ENST00000621022 103 ntBASIC0.05□□□□□ -2.4
CCL13Q99616 AC127459.3-201ENST00000624328 466 ntBASIC0.05□□□□□ -2.4
CCL13Q99616 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.05□□□□□ -2.4
CCL13Q99616 MIR18A-201ENST00000362310 71 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 RNU6-117P-201ENST00000365415 107 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 RNU4-45P-201ENST00000365469 141 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 CALM2P3-201ENST00000400429 449 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 AL353193.1-201ENST00000421444 268 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 AL365203.2-201ENST00000423444 196 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 MTCO2P19-201ENST00000427513 598 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 AC073464.1-201ENST00000429823 534 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.04□□□□□ -2.4
CCL13Q99616 SNRPGP12-201ENST00000449481 213 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 RNU6-1208P-201ENST00000459588 107 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.04□□□□□ -2.4
CCL13Q99616 AC105313.1-201ENST00000509121 353 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.04□□□□□ -2.4
CCL13Q99616 Y_RNA.670-201ENST00000516255 105 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 SNORA40.12-201ENST00000516329 111 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 Y_RNA.683-201ENST00000516508 93 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 SNORA18.7-201ENST00000516910 131 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 AC005730.3-201ENST00000583067 366 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 AC040904.1-201ENST00000590850 223 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 AC023932.2-201ENST00000603176 175 ntBASIC0.04□□□□□ -2.4
CCL13Q99616 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
CCL13Q99616 SNORD44.1-201ENST00000363202 61 ntBASIC0.03□□□□□ -2.4
CCL13Q99616 RNA5SP62-201ENST00000363457 110 ntBASIC0.03□□□□□ -2.4
CCL13Q99616 RNU4-20P-201ENST00000365601 151 ntBASIC0.03□□□□□ -2.4
CCL13Q99616 AC117470.1-201ENST00000381974 330 ntBASIC0.03□□□□□ -2.4
CCL13Q99616 RNU6-1103P-201ENST00000384150 107 ntBASIC0.03□□□□□ -2.4
CCL13Q99616 MIR15B-201ENST00000385045 98 ntBASIC0.03□□□□□ -2.4
CCL13Q99616 MIR1295A-201ENST00000408463 79 ntBASIC0.03□□□□□ -2.4
CCL13Q99616 MIR1302-7-201ENST00000408841 72 ntBASIC0.03□□□□□ -2.4
CCL13Q99616 RNA5SP95-201ENST00000410319 137 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms