Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 Y_RNA.675-201ENST00000516389 149 ntBASIC1.32□□□□□ -2.2
RAB40CQ96S21 RNU6-1012P-201ENST00000516606 109 ntBASIC1.32□□□□□ -2.2
RAB40CQ96S21 RNU6-548P-201ENST00000517083 115 ntBASIC1.32□□□□□ -2.2
RAB40CQ96S21 AC019176.1-201ENST00000518519 225 ntBASIC1.32□□□□□ -2.2
RAB40CQ96S21 AC011476.5-201ENST00000615594 130 ntBASIC1.32□□□□□ -2.2
RAB40CQ96S21 MIR4272-201ENST00000635924 64 ntBASIC1.32□□□□□ -2.2
RAB40CQ96S21 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.32□□□□□ -2.2
RAB40CQ96S21 RNU6-1123P-201ENST00000362347 106 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 Y_RNA.27-201ENST00000362540 103 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 Y_RNA.243-201ENST00000364481 109 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 RNU6-708P-201ENST00000384217 107 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 RNU6-1065P-201ENST00000384513 106 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 MIR513A1-201ENST00000385138 129 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 U8.13-201ENST00000390842 128 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 AL034345.1-201ENST00000407768 123 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 RN7SKP101-201ENST00000411376 320 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 AC091021.1-201ENST00000468051 388 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 AC108210.2-201ENST00000503681 201 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 RNU2-12P-201ENST00000517216 168 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 AC055872.1-201ENST00000570978 278 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.31□□□□□ -2.2
RAB40CQ96S21 MIR3937-201ENST00000580135 106 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 MIR4659A-201ENST00000580269 81 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 MIR4524B-201ENST00000581569 115 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 AC005176.2-201ENST00000596933 147 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 AL390123.1-201ENST00000603216 237 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 PRR13P7-201ENST00000605538 430 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 U6.92-201ENST00000636464 89 ntBASIC1.31□□□□□ -2.2
RAB40CQ96S21 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RAB40CQ96S21 ZNF72P-201ENST00000425869 1908 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RAB40CQ96S21 SNORD115-30-201ENST00000364117 82 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 RNA5SP259-201ENST00000365541 109 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.3□□□□□ -2.2
RAB40CQ96S21 Y_RNA.496-201ENST00000384444 101 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 RPS27P16-201ENST00000425758 201 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 AC023790.1-201ENST00000482174 347 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 RNU6-976P-201ENST00000516086 111 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 AC092447.9-201ENST00000603395 144 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 AC006380.1-201ENST00000603598 186 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 LARP7P1-201ENST00000605576 316 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 AL021879.1-201ENST00000611756 288 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 AC040896.1-201ENST00000613819 479 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 AC104985.2-201ENST00000620598 500 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 AC084768.2-201ENST00000622736 221 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 AC091925.1-201ENST00000623204 462 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 AC127459.3-201ENST00000624328 466 ntBASIC1.3□□□□□ -2.2
RAB40CQ96S21 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
RAB40CQ96S21 SNORD114-7-201ENST00000362520 77 ntBASIC1.29□□□□□ -2.2
RAB40CQ96S21 Y_RNA.39-201ENST00000362620 98 ntBASIC1.29□□□□□ -2.2
RAB40CQ96S21 RNU4-79P-201ENST00000362764 141 ntBASIC1.29□□□□□ -2.2
RAB40CQ96S21 Y_RNA.267-201ENST00000364679 109 ntBASIC1.29□□□□□ -2.2
RAB40CQ96S21 RNU6-20P-201ENST00000384106 107 ntBASIC1.29□□□□□ -2.2
RAB40CQ96S21 MIR562-201ENST00000384894 95 ntBASIC1.29□□□□□ -2.2
RAB40CQ96S21 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.29□□□□□ -2.2
RAB40CQ96S21 RPL30P13-201ENST00000418873 348 ntBASIC1.29□□□□□ -2.2
RAB40CQ96S21 STAG3L5P-204ENST00000443759 179 ntBASIC1.29□□□□□ -2.2
RAB40CQ96S21 snoU13.23-201ENST00000458863 104 ntBASIC1.29□□□□□ -2.2
RAB40CQ96S21 RNU2-56P-201ENST00000516826 190 ntBASIC1.29□□□□□ -2.2
RAB40CQ96S21 RNU6-295P-201ENST00000516901 104 ntBASIC1.29□□□□□ -2.2
RAB40CQ96S21 AL162424.1-201ENST00000602325 221 ntBASIC1.29□□□□□ -2.2
RAB40CQ96S21 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.29□□□□□ -2.2
RAB40CQ96S21 Y_RNA.101-201ENST00000363154 102 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 RNU6-626P-201ENST00000363354 107 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 Y_RNA.252-201ENST00000364556 101 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 Y_RNA.315-201ENST00000365117 102 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 RNU6-117P-201ENST00000365415 107 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 SNORA12.1-201ENST00000390873 148 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 Y_RNA.579-201ENST00000390939 94 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 RNU2-54P-201ENST00000410299 190 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 RNU6-955P-201ENST00000410497 104 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 RN7SKP51-201ENST00000410781 304 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 SDAD1P3-201ENST00000427380 333 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.28□□□□□ -2.2
RAB40CQ96S21 PGBD4P5-201ENST00000445958 426 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 SNORA70.12-201ENST00000516084 153 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 RNU6-341P-201ENST00000516973 96 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 RAB11AP2-201ENST00000545905 639 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.28□□□□□ -2.2
RAB40CQ96S21 MIR3124-201ENST00000582636 67 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 AC091178.2-201ENST00000584401 117 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 SNORA28-201ENST00000606769 126 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 AL365434.2-201ENST00000607979 234 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 MIR6845-201ENST00000613182 61 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 AL078604.3-201ENST00000615580 211 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 AC240442.1-201ENST00000616055 283 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 AC073349.3-201ENST00000617616 186 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 AL138825.1-201ENST00000618587 192 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.28□□□□□ -2.2
RAB40CQ96S21 AC006026.1-201ENST00000444025 1803 ntBASIC1.27□□□□□ -2.21
RAB40CQ96S21 Y_RNA.5-201ENST00000362334 102 ntBASIC1.27□□□□□ -2.21
RAB40CQ96S21 Y_RNA.265-201ENST00000364677 108 ntBASIC1.27□□□□□ -2.21
RAB40CQ96S21 RNU1-115P-201ENST00000365329 160 ntBASIC1.27□□□□□ -2.21
RAB40CQ96S21 Y_RNA.361-201ENST00000365515 120 ntBASIC1.27□□□□□ -2.21
RAB40CQ96S21 SNORA26.9-201ENST00000391322 122 ntBASIC1.27□□□□□ -2.21
RAB40CQ96S21 AC022028.1-201ENST00000412054 408 ntBASIC1.27□□□□□ -2.21
RAB40CQ96S21 AL135790.2-201ENST00000437701 267 ntBASIC1.27□□□□□ -2.21
RAB40CQ96S21 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms