Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AL137792.2-201ENST00000443484 235 ntBASIC1.37□□□□□ -2.19
RAB3IPQ96QF0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.37□□□□□ -2.19
RAB3IPQ96QF0 MTCO3P10-201ENST00000455912 772 ntBASIC1.37□□□□□ -2.19
RAB3IPQ96QF0 PRDX4P1-201ENST00000507189 574 ntBASIC1.37□□□□□ -2.19
RAB3IPQ96QF0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.37□□□□□ -2.19
RAB3IPQ96QF0 RNU6-1278P-201ENST00000516130 107 ntBASIC1.37□□□□□ -2.19
RAB3IPQ96QF0 RNA5SP168-201ENST00000516642 112 ntBASIC1.37□□□□□ -2.19
RAB3IPQ96QF0 SNORA20.3-201ENST00000516880 132 ntBASIC1.37□□□□□ -2.19
RAB3IPQ96QF0 AC023442.1-201ENST00000531247 422 ntBASIC1.37□□□□□ -2.19
RAB3IPQ96QF0 AL161670.1-201ENST00000554348 137 ntBASIC1.37□□□□□ -2.19
RAB3IPQ96QF0 AL353997.5-201ENST00000618886 171 ntBASIC1.37□□□□□ -2.19
RAB3IPQ96QF0 AC127459.3-201ENST00000624328 466 ntBASIC1.37□□□□□ -2.19
RAB3IPQ96QF0 AC068647.2-201ENST00000637380 353 ntBASIC1.37□□□□□ -2.19
RAB3IPQ96QF0 SNORA1B-201ENST00000362535 133 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 Y_RNA.474-201ENST00000384341 102 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 RNU6-505P-201ENST00000384427 107 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 CALM2P4-201ENST00000430810 426 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 AC233266.1-201ENST00000454518 96 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 Y_RNA.653-201ENST00000459091 95 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 RPL39P38-201ENST00000467018 153 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 RN7SKP179-201ENST00000516126 217 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 RNU6-341P-201ENST00000516973 96 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 AC091178.2-201ENST00000584401 117 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 AC113139.1-201ENST00000605049 239 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 AL355073.2-201ENST00000612106 557 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 AC242852.1-201ENST00000612151 96 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 AC244015.1-201ENST00000622301 99 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 AC099654.14-201ENST00000638599 341 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 ZNF72P-201ENST00000425869 1908 ntBASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RAB3IPQ96QF0 RNU6-961P-201ENST00000363893 105 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 RNU4-76P-201ENST00000364509 141 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 Y_RNA.390-201ENST00000383932 102 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 RNU6-1310P-201ENST00000384153 107 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 U8.16-201ENST00000391279 133 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 Y_RNA.605-201ENST00000410577 105 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 RBMX2P4-201ENST00000441256 376 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 SNRPGP13-201ENST00000442212 177 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 DYNLT3P2-201ENST00000442517 295 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 RNU6-470P-201ENST00000515954 104 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 RNU6-63P-201ENST00000516690 95 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 RNU6-922P-201ENST00000516753 99 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 RAB11AP2-201ENST00000545905 639 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 AC004467.1-201ENST00000615678 330 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 MTND4LP32-201ENST00000636111 270 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 AC005592.1-201ENST00000566527 1640 ntBASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.35□□□□□ -2.19
RAB3IPQ96QF0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
RAB3IPQ96QF0 U8.1-201ENST00000362843 134 ntBASIC1.34□□□□□ -2.19
RAB3IPQ96QF0 RNA5SP190-201ENST00000365222 118 ntBASIC1.34□□□□□ -2.19
RAB3IPQ96QF0 MIR562-201ENST00000384894 95 ntBASIC1.34□□□□□ -2.19
RAB3IPQ96QF0 MRPS18CP6-201ENST00000423587 223 ntBASIC1.34□□□□□ -2.19
RAB3IPQ96QF0 RNA5SP458-201ENST00000516188 119 ntBASIC1.34□□□□□ -2.19
RAB3IPQ96QF0 RNU7-4P-201ENST00000516961 62 ntBASIC1.34□□□□□ -2.19
RAB3IPQ96QF0 AC144568.1-201ENST00000520139 137 ntBASIC1.34□□□□□ -2.19
RAB3IPQ96QF0 AP002004.2-201ENST00000531656 154 ntBASIC1.34□□□□□ -2.19
RAB3IPQ96QF0 AC005828.6-201ENST00000606610 232 ntBASIC1.34□□□□□ -2.19
RAB3IPQ96QF0 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.34□□□□□ -2.19
RAB3IPQ96QF0 RNU6-457P-201ENST00000363999 107 ntBASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 RNA5SP99-201ENST00000364020 114 ntBASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 Y_RNA.243-201ENST00000364481 109 ntBASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 Y_RNA.314-201ENST00000365114 102 ntBASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 MIR150-201ENST00000385048 84 ntBASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 AL354695.1-201ENST00000427935 228 ntBASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 AC093850.1-201ENST00000454121 251 ntBASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 OR9P1P-201ENST00000496431 281 ntBASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 AL133373.1-201ENST00000497098 94 ntBASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 AC055872.1-201ENST00000570978 278 ntBASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 SNORD53B-201ENST00000577887 78 ntBASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
RAB3IPQ96QF0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
RAB3IPQ96QF0 RNU6-199P-201ENST00000362954 107 ntBASIC1.32□□□□□ -2.2
RAB3IPQ96QF0 Y_RNA.142-201ENST00000363491 102 ntBASIC1.32□□□□□ -2.2
RAB3IPQ96QF0 SNORA25.8-201ENST00000364831 128 ntBASIC1.32□□□□□ -2.2
RAB3IPQ96QF0 RNU6-117P-201ENST00000365415 107 ntBASIC1.32□□□□□ -2.2
RAB3IPQ96QF0 RNU6-424P-201ENST00000384367 105 ntBASIC1.32□□□□□ -2.2
RAB3IPQ96QF0 RNU6-1297P-201ENST00000384415 104 ntBASIC1.32□□□□□ -2.2
RAB3IPQ96QF0 MIR764-201ENST00000390811 85 ntBASIC1.32□□□□□ -2.2
RAB3IPQ96QF0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.32□□□□□ -2.2
RAB3IPQ96QF0 MIR1323-201ENST00000408090 73 ntBASIC1.32□□□□□ -2.2
RAB3IPQ96QF0 RNU6-1096P-201ENST00000517089 102 ntBASIC1.32□□□□□ -2.2
RAB3IPQ96QF0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.32□□□□□ -2.2
RAB3IPQ96QF0 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
RAB3IPQ96QF0 Y_RNA.259-201ENST00000364619 101 ntBASIC1.31□□□□□ -2.2
RAB3IPQ96QF0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.31□□□□□ -2.2
RAB3IPQ96QF0 SUMO1P2-201ENST00000452524 304 ntBASIC1.31□□□□□ -2.2
RAB3IPQ96QF0 SNORD13-201ENST00000459299 104 ntBASIC1.31□□□□□ -2.2
RAB3IPQ96QF0 AL049830.1-201ENST00000468034 425 ntBASIC1.31□□□□□ -2.2
RAB3IPQ96QF0 RNU7-12P-201ENST00000516030 62 ntBASIC1.31□□□□□ -2.2
RAB3IPQ96QF0 RNU7-28P-201ENST00000516759 62 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms