Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MIR7107-201ENST00000611489 80 ntBASIC-0.43□□□□□ -2.48
AP1S3Q96PC3 MIR499B-201ENST00000636498 73 ntBASIC-0.43□□□□□ -2.48
AP1S3Q96PC3 AC006927.3-201ENST00000638789 384 ntBASIC-0.43□□□□□ -2.48
AP1S3Q96PC3 MIR377-201ENST00000362145 69 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 RNY4P34-201ENST00000364779 95 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 RNU6-108P-201ENST00000365558 107 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 RNU6-716P-201ENST00000365621 103 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 MIR938-201ENST00000401216 83 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 AL358176.2-201ENST00000425769 204 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 AL353572.1-201ENST00000442490 417 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 RNU7-102P-201ENST00000458948 62 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 CCDC34P1-201ENST00000507441 517 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 MTND2P31-201ENST00000512602 616 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 RNU7-129P-201ENST00000516128 62 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 AL137161.1-201ENST00000532231 390 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 CPDP1-201ENST00000579660 283 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 AC007671.2-201ENST00000637344 619 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.44□□□□□ -2.48
AP1S3Q96PC3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 SNORD50.1-201ENST00000362987 71 ntBASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 RNU6-903P-201ENST00000391270 109 ntBASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 MTCO2P27-201ENST00000420740 428 ntBASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 SNRPGP10-201ENST00000432323 225 ntBASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 RPL17P19-201ENST00000489069 552 ntBASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 RN7SKP287-201ENST00000516546 266 ntBASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 RNA5SP268-201ENST00000516828 124 ntBASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 MIR4743-201ENST00000584576 69 ntBASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 AC005176.2-201ENST00000596933 147 ntBASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 U2.17-201ENST00000611454 95 ntBASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 uc_338.11-201ENST00000619132 160 ntBASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 AC010608.3-201ENST00000625048 527 ntBASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.45□□□□□ -2.48
AP1S3Q96PC3 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 MT-TN-201ENST00000387400 73 ntBASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 MIR760-201ENST00000390220 80 ntBASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 RNU6-325P-201ENST00000411132 105 ntBASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 AL606489.2-201ENST00000433886 234 ntBASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 AC009961.2-201ENST00000435771 251 ntBASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 U8.21-201ENST00000459536 136 ntBASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 RNU6-320P-201ENST00000516511 106 ntBASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 SNORD45.4-201ENST00000516629 73 ntBASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 MIR3941-201ENST00000582572 103 ntBASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 AC092447.9-201ENST00000603395 144 ntBASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 AP000240.1-201ENST00000609910 452 ntBASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 AC009248.2-201ENST00000619826 254 ntBASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 AC127459.3-201ENST00000624328 466 ntBASIC-0.46□□□□□ -2.48
AP1S3Q96PC3 RNU6-500P-201ENST00000362349 107 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 RNU6-282P-201ENST00000365357 103 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 RNU6-925P-201ENST00000384629 104 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 MIR521-1-201ENST00000384902 87 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 MIR522-201ENST00000385071 87 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 MIR214-201ENST00000385214 110 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 AC090844.1-201ENST00000422019 156 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 AC084290.1-201ENST00000434995 374 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 AC079354.2-201ENST00000453523 154 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 RNU7-165P-201ENST00000458864 60 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 SNORD4A-201ENST00000459174 72 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 GMFBP1-201ENST00000467831 427 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 SNORA25.10-201ENST00000515926 124 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 AC026371.1-201ENST00000551867 419 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 MIR548AB-201ENST00000584917 84 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 AC010525.2-201ENST00000590920 195 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 AL670379.3-201ENST00000605040 251 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 AL136370.1-201ENST00000608166 691 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.47□□□□□ -2.48
AP1S3Q96PC3 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 MIR15B-201ENST00000385045 98 ntBASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 MIR1197-201ENST00000408818 88 ntBASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 ZNF114P1-201ENST00000453500 292 ntBASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 RNU6-329P-201ENST00000459618 107 ntBASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 SNORA14.1-201ENST00000516113 141 ntBASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 RNU6-107P-201ENST00000516643 102 ntBASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 AC006566.1-201ENST00000608943 513 ntBASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 TUSC7.1-201ENST00000610969 165 ntBASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 AC022306.3-201ENST00000619930 550 ntBASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 MTND1P7-201ENST00000632801 297 ntBASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.48□□□□□ -2.49
AP1S3Q96PC3 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.49□□□□□ -2.49
AP1S3Q96PC3 SNORD50B-201ENST00000364995 70 ntBASIC-0.49□□□□□ -2.49
AP1S3Q96PC3 RNA5SP117-201ENST00000365294 118 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms