Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC010598.1-201ENST00000510378 103 ntBASIC2.28□□□□□ -2.04
VPS50Q96JG6 RNU6-1041P-201ENST00000516254 102 ntBASIC2.28□□□□□ -2.04
VPS50Q96JG6 RNU6-111P-201ENST00000517179 105 ntBASIC2.28□□□□□ -2.04
VPS50Q96JG6 AC005357.1-201ENST00000588399 301 ntBASIC2.28□□□□□ -2.04
VPS50Q96JG6 AC007229.1-201ENST00000590455 412 ntBASIC2.28□□□□□ -2.04
VPS50Q96JG6 MIR1291-201ENST00000627649 87 ntBASIC2.28□□□□□ -2.04
VPS50Q96JG6 AC009487.4-201ENST00000624969 3585 ntBASIC2.28□□□□□ -2.05
VPS50Q96JG6 AL159152.1-201ENST00000635019 2587 ntBASIC2.27□□□□□ -2.05
VPS50Q96JG6 SNORA27.1-201ENST00000362604 124 ntBASIC2.27□□□□□ -2.05
VPS50Q96JG6 U8.2-201ENST00000363156 134 ntBASIC2.27□□□□□ -2.05
VPS50Q96JG6 RNA5SP493-201ENST00000364115 91 ntBASIC2.27□□□□□ -2.05
VPS50Q96JG6 SNORA20.1-201ENST00000364790 130 ntBASIC2.27□□□□□ -2.05
VPS50Q96JG6 RNU6-338P-201ENST00000383888 105 ntBASIC2.27□□□□□ -2.05
VPS50Q96JG6 MIR518C-201ENST00000384822 101 ntBASIC2.27□□□□□ -2.05
VPS50Q96JG6 MIR548H3-201ENST00000408771 118 ntBASIC2.27□□□□□ -2.05
VPS50Q96JG6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.27□□□□□ -2.05
VPS50Q96JG6 AC011406.1-201ENST00000512440 370 ntBASIC2.27□□□□□ -2.05
VPS50Q96JG6 SNORA27.4-201ENST00000516650 95 ntBASIC2.27□□□□□ -2.05
VPS50Q96JG6 MIR4529-201ENST00000578110 78 ntBASIC2.27□□□□□ -2.05
VPS50Q96JG6 AL031274.2-201ENST00000599419 203 ntBASIC2.27□□□□□ -2.05
VPS50Q96JG6 AC037487.3-201ENST00000606668 112 ntBASIC2.27□□□□□ -2.05
VPS50Q96JG6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.27□□□□□ -2.05
VPS50Q96JG6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.27□□□□□ -2.05
VPS50Q96JG6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
VPS50Q96JG6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.27□□□□□ -2.05
VPS50Q96JG6 AC016717.2-201ENST00000609089 5141 ntBASIC2.27□□□□□ -2.05
VPS50Q96JG6 Y_RNA.20-201ENST00000362479 113 ntBASIC2.26□□□□□ -2.05
VPS50Q96JG6 Y_RNA.65-201ENST00000362846 100 ntBASIC2.26□□□□□ -2.05
VPS50Q96JG6 RNU6-407P-201ENST00000365280 104 ntBASIC2.26□□□□□ -2.05
VPS50Q96JG6 RNU6-514P-201ENST00000384208 107 ntBASIC2.26□□□□□ -2.05
VPS50Q96JG6 Y_RNA.489-201ENST00000384410 101 ntBASIC2.26□□□□□ -2.05
VPS50Q96JG6 AC008134.1-201ENST00000420943 193 ntBASIC2.26□□□□□ -2.05
VPS50Q96JG6 BX510359.4-201ENST00000423750 193 ntBASIC2.26□□□□□ -2.05
VPS50Q96JG6 RPL23AP7-203ENST00000449021 469 ntBASIC2.26□□□□□ -2.05
VPS50Q96JG6 RPS27P21-201ENST00000486977 252 ntBASIC2.26□□□□□ -2.05
VPS50Q96JG6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS50Q96JG6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.26□□□□□ -2.05
VPS50Q96JG6 AC026271.5-201ENST00000577873 130 ntBASIC2.26□□□□□ -2.05
VPS50Q96JG6 AL512605.2-201ENST00000592972 256 ntBASIC2.26□□□□□ -2.05
VPS50Q96JG6 AP000553.5-201ENST00000641933 54 ntBASIC2.26□□□□□ -2.05
VPS50Q96JG6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS50Q96JG6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
VPS50Q96JG6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.25□□□□□ -2.05
VPS50Q96JG6 Y_RNA.76-201ENST00000362931 109 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 Y_RNA.269-201ENST00000364685 89 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 Y_RNA.275-201ENST00000364726 110 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 Y_RNA.287-201ENST00000364853 94 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 RNU6-1318P-201ENST00000365389 103 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 RNU6-160P-201ENST00000384591 107 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 RNU6-417P-201ENST00000384712 107 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 MIR17-201ENST00000385012 84 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 MIR873-201ENST00000401120 77 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 RNU2-14P-201ENST00000411053 191 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 HMGN2P34-201ENST00000437647 269 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 AC055731.1-201ENST00000474387 401 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 RNA5SP20-201ENST00000515976 84 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 RNU6-63P-201ENST00000516690 95 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 SNORA31.25-201ENST00000517242 134 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 RNU2-19P-201ENST00000517288 84 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 MIR3169-201ENST00000578032 83 ntBASIC2.25□□□□□ -2.05
VPS50Q96JG6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS50Q96JG6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS50Q96JG6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
VPS50Q96JG6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
VPS50Q96JG6 AL356292.1-201ENST00000283110 373 ntBASIC2.24□□□□□ -2.05
VPS50Q96JG6 SNORA33-201ENST00000363664 130 ntBASIC2.24□□□□□ -2.05
VPS50Q96JG6 RNU6-1048P-201ENST00000364054 107 ntBASIC2.24□□□□□ -2.05
VPS50Q96JG6 RNU6-801P-201ENST00000364087 105 ntBASIC2.24□□□□□ -2.05
VPS50Q96JG6 Y_RNA.217-201ENST00000364214 105 ntBASIC2.24□□□□□ -2.05
VPS50Q96JG6 SNORA16B-201ENST00000364674 135 ntBASIC2.24□□□□□ -2.05
VPS50Q96JG6 SNORD116-13-201ENST00000384408 92 ntBASIC2.24□□□□□ -2.05
VPS50Q96JG6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.24□□□□□ -2.05
VPS50Q96JG6 Y_RNA.641-201ENST00000459414 105 ntBASIC2.24□□□□□ -2.05
VPS50Q96JG6 RPS27P22-201ENST00000478056 241 ntBASIC2.24□□□□□ -2.05
VPS50Q96JG6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.24□□□□□ -2.05
VPS50Q96JG6 RNU6-1337P-201ENST00000516525 95 ntBASIC2.24□□□□□ -2.05
VPS50Q96JG6 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS50Q96JG6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS50Q96JG6 AC067747.1-201ENST00000608026 250 ntBASIC2.24□□□□□ -2.05
VPS50Q96JG6 AC022513.1-201ENST00000624512 117 ntBASIC2.24□□□□□ -2.05
VPS50Q96JG6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
VPS50Q96JG6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.23□□□□□ -2.05
VPS50Q96JG6 UBE2WP1-201ENST00000362030 340 ntBASIC2.23□□□□□ -2.05
VPS50Q96JG6 RNU6-1289P-201ENST00000384431 106 ntBASIC2.23□□□□□ -2.05
VPS50Q96JG6 RNA5SP467-201ENST00000391274 118 ntBASIC2.23□□□□□ -2.05
VPS50Q96JG6 MIR1253-201ENST00000408273 105 ntBASIC2.23□□□□□ -2.05
VPS50Q96JG6 RNU6-855P-201ENST00000410395 104 ntBASIC2.23□□□□□ -2.05
VPS50Q96JG6 RNU1-131P-201ENST00000458943 161 ntBASIC2.23□□□□□ -2.05
VPS50Q96JG6 RPS26P55-201ENST00000471178 356 ntBASIC2.23□□□□□ -2.05
VPS50Q96JG6 AC104435.1-201ENST00000483483 166 ntBASIC2.23□□□□□ -2.05
VPS50Q96JG6 AC010409.1-201ENST00000487382 476 ntBASIC2.23□□□□□ -2.05
VPS50Q96JG6 MIR3684-201ENST00000579779 74 ntBASIC2.23□□□□□ -2.05
VPS50Q96JG6 AC103810.6-201ENST00000606708 136 ntBASIC2.23□□□□□ -2.05
VPS50Q96JG6 MIR6873-201ENST00000622788 63 ntBASIC2.23□□□□□ -2.05
VPS50Q96JG6 MIR338-201ENST00000636369 67 ntBASIC2.23□□□□□ -2.05
VPS50Q96JG6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
VPS50Q96JG6 AC068700.1-201ENST00000565862 3754 ntBASIC2.23□□□□□ -2.05
VPS50Q96JG6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms