Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 RNU6-1337P-201ENST00000516525 95 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.49□□□□□ -2.01
PTCD3Q96EY7 EIF4BP1-201ENST00000554881 351 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 AL049779.4-201ENST00000604500 156 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 AC108706.1-201ENST00000611053 297 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 MIR7106-201ENST00000612419 65 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 AC006386.2-201ENST00000624491 75 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 AC012005.1-201ENST00000624575 75 ntBASIC2.49□□□□□ -2.01
PTCD3Q96EY7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PTCD3Q96EY7 Y_RNA.24-201ENST00000362508 103 ntBASIC2.48□□□□□ -2.01
PTCD3Q96EY7 RNY1P5-201ENST00000383890 115 ntBASIC2.48□□□□□ -2.01
PTCD3Q96EY7 RNU6-220P-201ENST00000390919 107 ntBASIC2.48□□□□□ -2.01
PTCD3Q96EY7 MTCO1P44-201ENST00000441935 243 ntBASIC2.48□□□□□ -2.01
PTCD3Q96EY7 AP001486.1-201ENST00000463339 476 ntBASIC2.48□□□□□ -2.01
PTCD3Q96EY7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.48□□□□□ -2.01
PTCD3Q96EY7 SCARNA8-201ENST00000515924 131 ntBASIC2.48□□□□□ -2.01
PTCD3Q96EY7 AL033523.1-201ENST00000605153 153 ntBASIC2.48□□□□□ -2.01
PTCD3Q96EY7 AC009487.4-201ENST00000624969 3585 ntBASIC2.48□□□□□ -2.01
PTCD3Q96EY7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.47□□□□□ -2.01
PTCD3Q96EY7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PTCD3Q96EY7 Y_RNA.75-201ENST00000362927 97 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 Y_RNA.182-201ENST00000363880 111 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 SNORA80A-201ENST00000363922 136 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 RNU6-461P-201ENST00000364195 107 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 RNU6-312P-201ENST00000364629 107 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 Y_RNA.293-201ENST00000364908 93 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 RNU6-1130P-201ENST00000365434 107 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 AC063976.3-201ENST00000426849 329 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 AC025750.2-201ENST00000442609 450 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 AC074290.1-201ENST00000448883 135 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 HSPE1P13-201ENST00000451143 297 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.47□□□□□ -2.01
PTCD3Q96EY7 AC010531.2-201ENST00000465012 153 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 RPS26P55-201ENST00000471178 356 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.47□□□□□ -2.01
PTCD3Q96EY7 AC027419.1-201ENST00000522976 328 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 MIR3117-201ENST00000584034 78 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 AL356280.1-201ENST00000603614 379 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 AC004832.4-201ENST00000608952 331 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
PTCD3Q96EY7 AL365361.1-201ENST00000566942 3481 ntBASIC2.47□□□□□ -2.01
PTCD3Q96EY7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PTCD3Q96EY7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.47□□□□□ -2.01
PTCD3Q96EY7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PTCD3Q96EY7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PTCD3Q96EY7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PTCD3Q96EY7 MIR340-201ENST00000362125 95 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 RNU6-743P-201ENST00000364151 106 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 Y_RNA.272-201ENST00000364696 102 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 RNU6-438P-201ENST00000365561 103 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 RNU1-138P-201ENST00000384093 164 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 RNU6-1235P-201ENST00000384559 107 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 SNORA8.3-201ENST00000384679 139 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 Y_RNA.580-201ENST00000391004 95 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 RNU2-52P-201ENST00000410680 190 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 SUMO1P4-201ENST00000429430 302 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 RNU6-498P-201ENST00000459468 107 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 AC117454.1-201ENST00000491120 168 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.46□□□□□ -2.02
PTCD3Q96EY7 AC093259.1-201ENST00000509755 300 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 RNU6-453P-201ENST00000516819 85 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 SNORA48.11-201ENST00000517015 89 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 RNA5SP490-201ENST00000517141 136 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.46□□□□□ -2.02
PTCD3Q96EY7 AC013412.1-201ENST00000610687 192 ntBASIC2.46□□□□□ -2.02
PTCD3Q96EY7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
PTCD3Q96EY7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PTCD3Q96EY7 AL356292.1-201ENST00000283110 373 ntBASIC2.45□□□□□ -2.02
PTCD3Q96EY7 Y_RNA.23-201ENST00000362496 106 ntBASIC2.45□□□□□ -2.02
PTCD3Q96EY7 Y_RNA.332-201ENST00000365271 113 ntBASIC2.45□□□□□ -2.02
PTCD3Q96EY7 RNU6-407P-201ENST00000365280 104 ntBASIC2.45□□□□□ -2.02
PTCD3Q96EY7 RNU6-969P-201ENST00000383900 105 ntBASIC2.45□□□□□ -2.02
PTCD3Q96EY7 MIR526A2-201ENST00000390198 65 ntBASIC2.45□□□□□ -2.02
PTCD3Q96EY7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.45□□□□□ -2.02
PTCD3Q96EY7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.45□□□□□ -2.02
PTCD3Q96EY7 SEPT7P4-201ENST00000437076 306 ntBASIC2.45□□□□□ -2.02
PTCD3Q96EY7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.45□□□□□ -2.02
PTCD3Q96EY7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.45□□□□□ -2.02
PTCD3Q96EY7 AC018868.1-201ENST00000491307 315 ntBASIC2.45□□□□□ -2.02
PTCD3Q96EY7 RNA5SP20-201ENST00000515976 84 ntBASIC2.45□□□□□ -2.02
PTCD3Q96EY7 RNU7-115P-201ENST00000516433 55 ntBASIC2.45□□□□□ -2.02
PTCD3Q96EY7 RNU6-63P-201ENST00000516690 95 ntBASIC2.45□□□□□ -2.02
PTCD3Q96EY7 Y_RNA.802-201ENST00000614892 130 ntBASIC2.45□□□□□ -2.02
PTCD3Q96EY7 AC068647.2-201ENST00000637380 353 ntBASIC2.45□□□□□ -2.02
PTCD3Q96EY7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PTCD3Q96EY7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
PTCD3Q96EY7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PTCD3Q96EY7 AC062016.1-201ENST00000355719 319 ntBASIC2.44□□□□□ -2.02
PTCD3Q96EY7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PTCD3Q96EY7 MIR21-201ENST00000362134 72 ntBASIC2.44□□□□□ -2.02
PTCD3Q96EY7 RNU6-1205P-201ENST00000363625 106 ntBASIC2.44□□□□□ -2.02
PTCD3Q96EY7 SNORA19-201ENST00000384737 128 ntBASIC2.44□□□□□ -2.02
PTCD3Q96EY7 RNU6-578P-201ENST00000390980 103 ntBASIC2.44□□□□□ -2.02
PTCD3Q96EY7 HSPE1P21-201ENST00000438283 308 ntBASIC2.44□□□□□ -2.02
PTCD3Q96EY7 AL445687.1-201ENST00000439946 251 ntBASIC2.44□□□□□ -2.02
PTCD3Q96EY7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.44□□□□□ -2.02
PTCD3Q96EY7 CYP2C59P-201ENST00000457790 269 ntBASIC2.44□□□□□ -2.02
PTCD3Q96EY7 RNA5SP356-201ENST00000515972 94 ntBASIC2.44□□□□□ -2.02
PTCD3Q96EY7 RN7SKP164-201ENST00000516138 266 ntBASIC2.44□□□□□ -2.02
PTCD3Q96EY7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 267.2 ms