Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 RNU4-84P-201ENST00000364200 139 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 RNU6-449P-201ENST00000383914 107 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 RNY3P5-201ENST00000384127 102 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 MIR515-2-201ENST00000384883 83 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 MIR515-1-201ENST00000384884 83 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 MIR520G-201ENST00000385064 90 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 Y_RNA.580-201ENST00000391004 95 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 RNU6-1186P-201ENST00000410429 97 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 RNU5E-9P-201ENST00000411164 104 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 ATP5J2P3-201ENST00000451550 258 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 RNU7-200P-201ENST00000516105 62 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 RNU7-99P-201ENST00000516271 62 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 AC109810.1-201ENST00000534066 224 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 AL353149.1-201ENST00000610667 244 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 AL359075.3-201ENST00000613288 217 ntBASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FOXRED1Q96CU9 RNU4-41P-201ENST00000364426 143 ntBASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 Y_RNA.333-201ENST00000365274 102 ntBASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 RNU6-728P-201ENST00000365375 104 ntBASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 Y_RNA.398-201ENST00000383952 99 ntBASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 AL606845.1-201ENST00000404881 255 ntBASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 RPL23AP83-201ENST00000434984 473 ntBASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 AC018634.1-201ENST00000437554 401 ntBASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 AL121914.1-201ENST00000450188 156 ntBASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 AC023449.1-201ENST00000454464 154 ntBASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 AC107027.2-201ENST00000512197 115 ntBASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 SCARNA8-201ENST00000515924 131 ntBASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 RNA5SP76-201ENST00000516277 87 ntBASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 RNU6-453P-201ENST00000516819 85 ntBASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
FOXRED1Q96CU9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.58□□□□□ -2
FOXRED1Q96CU9 SNORD116-18-201ENST00000383961 92 ntBASIC2.58□□□□□ -2
FOXRED1Q96CU9 RNU6-239P-201ENST00000390990 99 ntBASIC2.58□□□□□ -2
FOXRED1Q96CU9 MIR1262-201ENST00000408276 93 ntBASIC2.58□□□□□ -2
FOXRED1Q96CU9 BX510359.1-201ENST00000456973 237 ntBASIC2.58□□□□□ -2
FOXRED1Q96CU9 RNU7-26P-201ENST00000458980 63 ntBASIC2.58□□□□□ -2
FOXRED1Q96CU9 RNU1-142P-201ENST00000516682 145 ntBASIC2.58□□□□□ -2
FOXRED1Q96CU9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.58□□□□□ -2
FOXRED1Q96CU9 CYCSP26-201ENST00000534107 320 ntBASIC2.58□□□□□ -2
FOXRED1Q96CU9 AC107016.2-201ENST00000547968 190 ntBASIC2.58□□□□□ -2
FOXRED1Q96CU9 MIR3126-201ENST00000577443 74 ntBASIC2.58□□□□□ -2
FOXRED1Q96CU9 AC073413.2-201ENST00000604332 360 ntBASIC2.58□□□□□ -2
FOXRED1Q96CU9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.58□□□□□ -2
FOXRED1Q96CU9 MIR3651-201ENST00000630427 90 ntBASIC2.58□□□□□ -2
FOXRED1Q96CU9 MIR338-201ENST00000636369 67 ntBASIC2.58□□□□□ -2
FOXRED1Q96CU9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.58□□□□□ -2
FOXRED1Q96CU9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
FOXRED1Q96CU9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.57□□□□□ -2
FOXRED1Q96CU9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.57□□□□□ -2
FOXRED1Q96CU9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.57□□□□□ -2
FOXRED1Q96CU9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.57□□□□□ -2
FOXRED1Q96CU9 SNORD114-6-201ENST00000364393 72 ntBASIC2.57□□□□□ -2
FOXRED1Q96CU9 RNU6-187P-201ENST00000384139 106 ntBASIC2.57□□□□□ -2
FOXRED1Q96CU9 MIR181B1-201ENST00000385240 110 ntBASIC2.57□□□□□ -2
FOXRED1Q96CU9 RNA5SP323-201ENST00000391094 133 ntBASIC2.57□□□□□ -2
FOXRED1Q96CU9 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.57□□□□□ -2
FOXRED1Q96CU9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.57□□□□□ -2
FOXRED1Q96CU9 AC063976.3-201ENST00000426849 329 ntBASIC2.57□□□□□ -2
FOXRED1Q96CU9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.57□□□□□ -2
FOXRED1Q96CU9 RPS4XP11-201ENST00000446897 772 ntBASIC2.57□□□□□ -2
FOXRED1Q96CU9 MTND5P41-201ENST00000517498 206 ntBASIC2.57□□□□□ -2
FOXRED1Q96CU9 AC011604.1-201ENST00000545978 196 ntBASIC2.57□□□□□ -2
FOXRED1Q96CU9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.57□□□□□ -2
FOXRED1Q96CU9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.57□□□□□ -2
FOXRED1Q96CU9 YPEL5P2-201ENST00000605553 359 ntBASIC2.57□□□□□ -2
FOXRED1Q96CU9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.57□□□□□ -2
FOXRED1Q96CU9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.57□□□□□ -2
FOXRED1Q96CU9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
FOXRED1Q96CU9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.56□□□□□ -2
FOXRED1Q96CU9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.56□□□□□ -2
FOXRED1Q96CU9 AC073325.2-201ENST00000339545 159 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 MIR22-201ENST00000362190 85 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 RNU1-35P-201ENST00000362782 153 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 Y_RNA.203-201ENST00000364106 102 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 RNU1-91P-201ENST00000364746 163 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 MIR491-201ENST00000384877 84 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 MIR562-201ENST00000384894 95 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 MIR15B-201ENST00000385045 98 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 MIR29C-201ENST00000385231 88 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 MT-TT-201ENST00000387460 66 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 SNORD67-201ENST00000390833 111 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 AL109933.2-201ENST00000452651 260 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 YWHAEP4-201ENST00000505390 198 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 RNU6-406P-201ENST00000516470 107 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 RNU6-1096P-201ENST00000517089 102 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 UBL5P2-201ENST00000583788 219 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 AC007318.2-201ENST00000620999 243 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 AC245060.5-201ENST00000610778 3293 ntBASIC2.56□□□□□ -2
FOXRED1Q96CU9 RNU6-23P-201ENST00000363283 107 ntBASIC2.55□□□□□ -2
FOXRED1Q96CU9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
FOXRED1Q96CU9 MIR483-201ENST00000385070 76 ntBASIC2.55□□□□□ -2
FOXRED1Q96CU9 RNA5SP467-201ENST00000391274 118 ntBASIC2.55□□□□□ -2
FOXRED1Q96CU9 SNORA79-201ENST00000408376 140 ntBASIC2.55□□□□□ -2
FOXRED1Q96CU9 RN7SKP101-201ENST00000411376 320 ntBASIC2.55□□□□□ -2
FOXRED1Q96CU9 CST2P1-201ENST00000425770 87 ntBASIC2.55□□□□□ -2
FOXRED1Q96CU9 RN7SL504P-201ENST00000494496 287 ntBASIC2.55□□□□□ -2
FOXRED1Q96CU9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.55□□□□□ -2
FOXRED1Q96CU9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms