Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RNU6-1012P-201ENST00000516606 109 ntBASIC1.06□□□□□ -2.24
RPUSD4Q96CM3 RNU7-28P-201ENST00000516759 62 ntBASIC1.06□□□□□ -2.24
RPUSD4Q96CM3 AC005730.3-201ENST00000583067 366 ntBASIC1.06□□□□□ -2.24
RPUSD4Q96CM3 AC073413.2-201ENST00000604332 360 ntBASIC1.06□□□□□ -2.24
RPUSD4Q96CM3 MIR8063-201ENST00000621930 81 ntBASIC1.06□□□□□ -2.24
RPUSD4Q96CM3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 Y_RNA.384-201ENST00000383909 102 ntBASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 FCF1P4-201ENST00000448326 183 ntBASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 RPL30P15-201ENST00000457129 321 ntBASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 snoU13.26-201ENST00000459452 105 ntBASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 RPL39P38-201ENST00000467018 153 ntBASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 RNU6-120P-201ENST00000516077 103 ntBASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 RNU6-1278P-201ENST00000516130 107 ntBASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 RPL21P9-201ENST00000556149 474 ntBASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 AC068338.1-201ENST00000565567 176 ntBASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 AC073349.3-201ENST00000617616 186 ntBASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 MIR1302-1-201ENST00000637932 143 ntBASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
RPUSD4Q96CM3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 SNORD115-30-201ENST00000364117 82 ntBASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 Y_RNA.259-201ENST00000364619 101 ntBASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 MIR520G-201ENST00000385064 90 ntBASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 SNORA67.5-201ENST00000391036 107 ntBASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 SNORD78.2-201ENST00000391076 69 ntBASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 MRPS18CP6-201ENST00000423587 223 ntBASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 SNX2P2-201ENST00000424553 323 ntBASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 HSPE1P13-201ENST00000451143 297 ntBASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 AC105758.1-201ENST00000506038 399 ntBASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 AP002004.2-201ENST00000531656 154 ntBASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 AL050343.2-201ENST00000607338 280 ntBASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 AC040896.1-201ENST00000613819 479 ntBASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 AL078604.3-201ENST00000615580 211 ntBASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 U2.1-201ENST00000618978 145 ntBASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.04□□□□□ -2.24
RPUSD4Q96CM3 RNU6-1115P-201ENST00000362490 106 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 Y_RNA.27-201ENST00000362540 103 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 RNU6-961P-201ENST00000363893 105 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 Y_RNA.187-201ENST00000363918 113 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 RNU4-13P-201ENST00000364019 141 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 Y_RNA.230-201ENST00000364348 109 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 MIR660-201ENST00000385235 97 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 RNU6-1009P-201ENST00000390996 107 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 MTCO2P27-201ENST00000420740 428 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 MTND5P20-201ENST00000448677 143 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 SNORD19B-201ENST00000459623 84 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 RNU6-548P-201ENST00000517083 115 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 AC090821.2-201ENST00000523552 176 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 MIR3945-201ENST00000581853 98 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 AL645939.4-201ENST00000604495 135 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 AC240442.1-201ENST00000616055 283 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 AC127459.3-201ENST00000624328 466 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 MTND4LP32-201ENST00000636111 270 ntBASIC1.03□□□□□ -2.24
RPUSD4Q96CM3 RNU1-115P-201ENST00000365329 160 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 Y_RNA.463-201ENST00000384271 102 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 MIR653-201ENST00000385279 96 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 RNA5SP482-201ENST00000391269 118 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 RNU2-54P-201ENST00000410299 190 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 AF228730.4-201ENST00000421457 183 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 Y_RNA.632-201ENST00000459189 102 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 OR9P1P-201ENST00000496431 281 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 RNU6-408P-201ENST00000515910 100 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 SNORA70.12-201ENST00000516084 153 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 AC027419.1-201ENST00000522976 328 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 AL512310.8-201ENST00000550183 120 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 AL355375.2-201ENST00000574825 175 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 MIR3937-201ENST00000580135 106 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 VN1R91P-201ENST00000594377 169 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 AL365434.2-201ENST00000607979 234 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 AC004467.1-201ENST00000615678 330 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 AC010205.1-201ENST00000616668 449 ntBASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
RPUSD4Q96CM3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
RPUSD4Q96CM3 ZNF72P-201ENST00000425869 1908 ntBASIC1.01□□□□□ -2.25
RPUSD4Q96CM3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.01□□□□□ -2.25
RPUSD4Q96CM3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
RPUSD4Q96CM3 Y_RNA.124-201ENST00000363339 93 ntBASIC1.01□□□□□ -2.25
RPUSD4Q96CM3 Y_RNA.252-201ENST00000364556 101 ntBASIC1.01□□□□□ -2.25
RPUSD4Q96CM3 RNU6-407P-201ENST00000365280 104 ntBASIC1.01□□□□□ -2.25
RPUSD4Q96CM3 RNU6-424P-201ENST00000384367 105 ntBASIC1.01□□□□□ -2.25
RPUSD4Q96CM3 MIR618-201ENST00000385287 98 ntBASIC1.01□□□□□ -2.25
RPUSD4Q96CM3 AC093019.1-201ENST00000443135 252 ntBASIC1.01□□□□□ -2.25
RPUSD4Q96CM3 AC091021.1-201ENST00000468051 388 ntBASIC1.01□□□□□ -2.25
RPUSD4Q96CM3 AL163540.1-201ENST00000485382 386 ntBASIC1.01□□□□□ -2.25
RPUSD4Q96CM3 RNU1-92P-201ENST00000517017 135 ntBASIC1.01□□□□□ -2.25
RPUSD4Q96CM3 RNU6-699P-201ENST00000517081 110 ntBASIC1.01□□□□□ -2.25
RPUSD4Q96CM3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.01□□□□□ -2.25
RPUSD4Q96CM3 AC055872.1-201ENST00000570978 278 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms