Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 Y_RNA.256-201ENST00000364594 104 ntBASIC0.56□□□□□ -2.32
APH1AQ96BI3 RNU6-407P-201ENST00000365280 104 ntBASIC0.56□□□□□ -2.32
APH1AQ96BI3 SNORD116-11-201ENST00000383882 92 ntBASIC0.56□□□□□ -2.32
APH1AQ96BI3 SNORD116-9-201ENST00000384000 95 ntBASIC0.56□□□□□ -2.32
APH1AQ96BI3 SNORD116-3-201ENST00000384287 95 ntBASIC0.56□□□□□ -2.32
APH1AQ96BI3 SNORD116-7-201ENST00000384404 95 ntBASIC0.56□□□□□ -2.32
APH1AQ96BI3 SNORD116-5-201ENST00000384462 95 ntBASIC0.56□□□□□ -2.32
APH1AQ96BI3 RNU6-306P-201ENST00000384617 107 ntBASIC0.56□□□□□ -2.32
APH1AQ96BI3 RNU6-332P-201ENST00000391193 108 ntBASIC0.56□□□□□ -2.32
APH1AQ96BI3 USMG5P1-201ENST00000425964 177 ntBASIC0.56□□□□□ -2.32
APH1AQ96BI3 MTND3P23-201ENST00000431980 347 ntBASIC0.56□□□□□ -2.32
APH1AQ96BI3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.56□□□□□ -2.32
APH1AQ96BI3 AC098869.1-201ENST00000481627 292 ntBASIC0.56□□□□□ -2.32
APH1AQ96BI3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.56□□□□□ -2.32
APH1AQ96BI3 RNU6-1291P-201ENST00000516591 104 ntBASIC0.56□□□□□ -2.32
APH1AQ96BI3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.56□□□□□ -2.32
APH1AQ96BI3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.56□□□□□ -2.32
APH1AQ96BI3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.56□□□□□ -2.32
APH1AQ96BI3 AC004812.1-201ENST00000540773 146 ntBASIC0.56□□□□□ -2.32
APH1AQ96BI3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
APH1AQ96BI3 SNORA27.1-201ENST00000362604 124 ntBASIC0.55□□□□□ -2.32
APH1AQ96BI3 RNU6-595P-201ENST00000363944 107 ntBASIC0.55□□□□□ -2.32
APH1AQ96BI3 Y_RNA.269-201ENST00000364685 89 ntBASIC0.55□□□□□ -2.32
APH1AQ96BI3 Y_RNA.414-201ENST00000384011 101 ntBASIC0.55□□□□□ -2.32
APH1AQ96BI3 MIR526A1-201ENST00000384897 85 ntBASIC0.55□□□□□ -2.32
APH1AQ96BI3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
APH1AQ96BI3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.55□□□□□ -2.32
APH1AQ96BI3 AC018865.2-201ENST00000423631 129 ntBASIC0.55□□□□□ -2.32
APH1AQ96BI3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.55□□□□□ -2.32
APH1AQ96BI3 AC113410.1-201ENST00000505029 247 ntBASIC0.55□□□□□ -2.32
APH1AQ96BI3 AC046134.1-201ENST00000514454 666 ntBASIC0.55□□□□□ -2.32
APH1AQ96BI3 RNU6-1114P-201ENST00000516022 107 ntBASIC0.55□□□□□ -2.32
APH1AQ96BI3 Y_RNA.688-201ENST00000516565 95 ntBASIC0.55□□□□□ -2.32
APH1AQ96BI3 AC093023.1-201ENST00000547375 507 ntBASIC0.55□□□□□ -2.32
APH1AQ96BI3 ZNF299P-201ENST00000406845 1804 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
APH1AQ96BI3 AC023934.1-201ENST00000574529 2389 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 RNU4-12P-201ENST00000365233 139 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 RNU6-596P-201ENST00000365395 98 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 RNU1-139P-201ENST00000391307 165 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 RNU5A-5P-201ENST00000411054 116 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 USP9YP16-201ENST00000430287 407 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 Z98949.2-201ENST00000440996 144 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 AC233266.1-201ENST00000454518 96 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 USP9YP23-201ENST00000455085 407 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.54□□□□□ -2.32
APH1AQ96BI3 RNU6-1116P-201ENST00000517269 99 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 AL358944.1-201ENST00000528537 144 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 AC004817.2-201ENST00000561794 651 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 MIR3192-201ENST00000584920 77 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 AC012557.2-201ENST00000605919 418 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 AC242852.1-201ENST00000612151 96 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 RMST_2.1-201ENST00000617263 136 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 AC244015.1-201ENST00000622301 99 ntBASIC0.54□□□□□ -2.32
APH1AQ96BI3 RNU6-222P-201ENST00000362438 107 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 Y_RNA.38-201ENST00000362617 102 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 RNU6-451P-201ENST00000362921 107 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 RNU6-833P-201ENST00000363486 107 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 RNY3P3-201ENST00000363816 102 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.53□□□□□ -2.32
APH1AQ96BI3 RNU6-1264P-201ENST00000383891 107 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 Y_RNA.490-201ENST00000384413 102 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 MIR891A-201ENST00000401237 79 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 RNU6-733P-201ENST00000410759 104 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.53□□□□□ -2.32
APH1AQ96BI3 RNU6-1278P-201ENST00000516130 107 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 Y_RNA.706-201ENST00000516933 99 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.53□□□□□ -2.32
APH1AQ96BI3 AC090617.3-201ENST00000573670 475 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 AC100812.1-201ENST00000607622 580 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 AC245008.1-201ENST00000608123 476 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
APH1AQ96BI3 AC073544.1-201ENST00000600110 1595 ntBASIC0.53□□□□□ -2.33
APH1AQ96BI3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
APH1AQ96BI3 Y_RNA.106-201ENST00000363189 100 ntBASIC0.52□□□□□ -2.33
APH1AQ96BI3 RNU4-41P-201ENST00000364426 143 ntBASIC0.52□□□□□ -2.33
APH1AQ96BI3 Y_RNA.336-201ENST00000365307 109 ntBASIC0.52□□□□□ -2.33
APH1AQ96BI3 RNU6-163P-201ENST00000384396 106 ntBASIC0.52□□□□□ -2.33
APH1AQ96BI3 ELOCP21-201ENST00000412558 336 ntBASIC0.52□□□□□ -2.33
APH1AQ96BI3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.52□□□□□ -2.33
APH1AQ96BI3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.52□□□□□ -2.33
APH1AQ96BI3 AC093019.1-201ENST00000443135 252 ntBASIC0.52□□□□□ -2.33
APH1AQ96BI3 AL137792.2-201ENST00000443484 235 ntBASIC0.52□□□□□ -2.33
APH1AQ96BI3 UQCRBP2-201ENST00000447827 297 ntBASIC0.52□□□□□ -2.33
APH1AQ96BI3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.52□□□□□ -2.33
APH1AQ96BI3 AP003716.2-201ENST00000528260 108 ntBASIC0.52□□□□□ -2.33
APH1AQ96BI3 AC127459.3-201ENST00000624328 466 ntBASIC0.52□□□□□ -2.33
APH1AQ96BI3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
APH1AQ96BI3 RNA5SP264-201ENST00000363115 107 ntBASIC0.51□□□□□ -2.33
APH1AQ96BI3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.51□□□□□ -2.33
APH1AQ96BI3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.51□□□□□ -2.33
APH1AQ96BI3 RNU6-136P-201ENST00000384663 107 ntBASIC0.51□□□□□ -2.33
APH1AQ96BI3 MIR329-1-201ENST00000385028 80 ntBASIC0.51□□□□□ -2.33
APH1AQ96BI3 MIR520G-201ENST00000385064 90 ntBASIC0.51□□□□□ -2.33
APH1AQ96BI3 RNU6-1001P-201ENST00000411265 100 ntBASIC0.51□□□□□ -2.33
APH1AQ96BI3 U7.7-201ENST00000459276 60 ntBASIC0.51□□□□□ -2.33
APH1AQ96BI3 snoU13.18-201ENST00000459483 104 ntBASIC0.51□□□□□ -2.33
APH1AQ96BI3 MTND5P16-201ENST00000460269 1703 ntBASIC0.51□□□□□ -2.33
APH1AQ96BI3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms