Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 SNORA44-201ENST00000384584 132 ntBASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 FO393413.1-201ENST00000402892 195 ntBASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 SNORA79-201ENST00000408376 140 ntBASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 AC010154.1-201ENST00000425857 269 ntBASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 U7.2-201ENST00000607576 63 ntBASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
VTI1AQ96AJ9 RNU6-44P-201ENST00000384045 107 ntBASIC3.62□□□□□ -1.83
VTI1AQ96AJ9 Y_RNA.432-201ENST00000384087 111 ntBASIC3.62□□□□□ -1.83
VTI1AQ96AJ9 MIR95-201ENST00000385072 81 ntBASIC3.62□□□□□ -1.83
VTI1AQ96AJ9 AL161788.1-201ENST00000441805 169 ntBASIC3.62□□□□□ -1.83
VTI1AQ96AJ9 AL357134.1-201ENST00000445848 426 ntBASIC3.62□□□□□ -1.83
VTI1AQ96AJ9 EEF1B2P7-201ENST00000451177 676 ntBASIC3.62□□□□□ -1.83
VTI1AQ96AJ9 RNU7-107P-201ENST00000459121 61 ntBASIC3.62□□□□□ -1.83
VTI1AQ96AJ9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.62□□□□□ -1.83
VTI1AQ96AJ9 MIR5739-201ENST00000619803 80 ntBASIC3.62□□□□□ -1.83
VTI1AQ96AJ9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VTI1AQ96AJ9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 Y_RNA.203-201ENST00000364106 102 ntBASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 Y_RNA.294-201ENST00000364916 102 ntBASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 RNU6-805P-201ENST00000365643 106 ntBASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 RNU2-48P-201ENST00000410694 191 ntBASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 RNU2-55P-201ENST00000411146 174 ntBASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 AC093259.1-201ENST00000509755 300 ntBASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 RNU6-991P-201ENST00000516168 107 ntBASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 RNU7-172P-201ENST00000517125 64 ntBASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 RPL23AP91-201ENST00000569211 455 ntBASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 MIR3124-201ENST00000582636 67 ntBASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 UBL5P2-201ENST00000583788 219 ntBASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 uc_338.1-201ENST00000612113 180 ntBASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VTI1AQ96AJ9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.6□□□□□ -1.83
VTI1AQ96AJ9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VTI1AQ96AJ9 Y_RNA.332-201ENST00000365271 113 ntBASIC3.6□□□□□ -1.83
VTI1AQ96AJ9 AL035461.1-201ENST00000421490 332 ntBASIC3.6□□□□□ -1.83
VTI1AQ96AJ9 AC245047.4-201ENST00000433189 144 ntBASIC3.6□□□□□ -1.83
VTI1AQ96AJ9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.6□□□□□ -1.83
VTI1AQ96AJ9 RN7SL442P-201ENST00000473804 320 ntBASIC3.6□□□□□ -1.83
VTI1AQ96AJ9 AC008885.1-201ENST00000514930 301 ntBASIC3.6□□□□□ -1.83
VTI1AQ96AJ9 RNU6-1299P-201ENST00000516316 100 ntBASIC3.6□□□□□ -1.83
VTI1AQ96AJ9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
VTI1AQ96AJ9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
VTI1AQ96AJ9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VTI1AQ96AJ9 RNU6-461P-201ENST00000364195 107 ntBASIC3.59□□□□□ -1.83
VTI1AQ96AJ9 AC123900.1-201ENST00000420390 96 ntBASIC3.59□□□□□ -1.83
VTI1AQ96AJ9 AC092427.1-202ENST00000430569 476 ntBASIC3.59□□□□□ -1.83
VTI1AQ96AJ9 CST9LP2-201ENST00000437612 320 ntBASIC3.59□□□□□ -1.83
VTI1AQ96AJ9 SNORD11-201ENST00000459124 84 ntBASIC3.59□□□□□ -1.83
VTI1AQ96AJ9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.59□□□□□ -1.83
VTI1AQ96AJ9 SNORA64.4-201ENST00000516632 81 ntBASIC3.59□□□□□ -1.83
VTI1AQ96AJ9 RNU6-856P-201ENST00000516959 98 ntBASIC3.59□□□□□ -1.83
VTI1AQ96AJ9 AC090142.3-201ENST00000519012 385 ntBASIC3.59□□□□□ -1.83
VTI1AQ96AJ9 AC104027.1-201ENST00000521887 300 ntBASIC3.59□□□□□ -1.83
VTI1AQ96AJ9 AL160236.1-201ENST00000556317 195 ntBASIC3.59□□□□□ -1.83
VTI1AQ96AJ9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.59□□□□□ -1.83
VTI1AQ96AJ9 U2.20-201ENST00000613956 192 ntBASIC3.59□□□□□ -1.83
VTI1AQ96AJ9 uc_338.4-201ENST00000616635 176 ntBASIC3.59□□□□□ -1.83
VTI1AQ96AJ9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
VTI1AQ96AJ9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 Y_RNA.91-201ENST00000363042 107 ntBASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 Y_RNA.796-201ENST00000364268 102 ntBASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 SNORA71.1-201ENST00000364523 117 ntBASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 RNU6-1325P-201ENST00000364905 105 ntBASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 Y_RNA.799-201ENST00000364992 102 ntBASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 Y_RNA.584-201ENST00000391090 114 ntBASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 RNA5SP492-201ENST00000411330 114 ntBASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 AC060773.1-201ENST00000421698 310 ntBASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 AC023141.11-201ENST00000508864 202 ntBASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 SNORD77.4-201ENST00000516158 81 ntBASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 RNU6-919P-201ENST00000516731 104 ntBASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 AC011604.1-201ENST00000545978 196 ntBASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 AC006023.1-201ENST00000603944 259 ntBASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 AL033523.1-201ENST00000605153 153 ntBASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.58□□□□□ -1.84
VTI1AQ96AJ9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VTI1AQ96AJ9 RNU6-1209P-201ENST00000363655 107 ntBASIC3.57□□□□□ -1.84
VTI1AQ96AJ9 RNU6-1080P-201ENST00000383982 107 ntBASIC3.57□□□□□ -1.84
VTI1AQ96AJ9 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.57□□□□□ -1.84
VTI1AQ96AJ9 RNU6-56P-201ENST00000516986 93 ntBASIC3.57□□□□□ -1.84
VTI1AQ96AJ9 SNORA48.11-201ENST00000517015 89 ntBASIC3.57□□□□□ -1.84
VTI1AQ96AJ9 SNORA31.26-201ENST00000517250 137 ntBASIC3.57□□□□□ -1.84
VTI1AQ96AJ9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
VTI1AQ96AJ9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms