Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 U2.16-201ENST00000613119 191 ntBASIC1.64□□□□□ -2.15
RFT1Q96AA3 U2.12-201ENST00000613778 191 ntBASIC1.64□□□□□ -2.15
RFT1Q96AA3 U2.20-201ENST00000613956 192 ntBASIC1.64□□□□□ -2.15
RFT1Q96AA3 U2.9-201ENST00000615427 191 ntBASIC1.64□□□□□ -2.15
RFT1Q96AA3 U2.11-201ENST00000616345 191 ntBASIC1.64□□□□□ -2.15
RFT1Q96AA3 U2.2-201ENST00000616535 191 ntBASIC1.64□□□□□ -2.15
RFT1Q96AA3 U2.3-201ENST00000617785 191 ntBASIC1.64□□□□□ -2.15
RFT1Q96AA3 U2.19-201ENST00000618602 191 ntBASIC1.64□□□□□ -2.15
RFT1Q96AA3 RNU2-1-201ENST00000618664 191 ntBASIC1.64□□□□□ -2.15
RFT1Q96AA3 U2.6-201ENST00000619225 191 ntBASIC1.64□□□□□ -2.15
RFT1Q96AA3 U2.5-201ENST00000619465 191 ntBASIC1.64□□□□□ -2.15
RFT1Q96AA3 U2.10-201ENST00000620268 191 ntBASIC1.64□□□□□ -2.15
RFT1Q96AA3 snoZ196.1-201ENST00000625269 89 ntBASIC1.64□□□□□ -2.15
RFT1Q96AA3 MIR338-201ENST00000636369 67 ntBASIC1.64□□□□□ -2.15
RFT1Q96AA3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.64□□□□□ -2.15
RFT1Q96AA3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.63□□□□□ -2.15
RFT1Q96AA3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 Y_RNA.447-201ENST00000384184 113 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 RNU6-793P-201ENST00000384233 104 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 Y_RNA.477-201ENST00000384352 108 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 Y_RNA.526-201ENST00000384572 110 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 RNU6-907P-201ENST00000390924 102 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
RFT1Q96AA3 SNORA3.2-201ENST00000408221 125 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 RNU4-30P-201ENST00000410245 143 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 RNA5SP425-201ENST00000410336 112 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 RNU2-2P-201ENST00000410396 191 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 AL445646.1-201ENST00000431784 216 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 AC005002.2-201ENST00000438228 269 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 HSPE1P25-201ENST00000455484 251 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 RNU6-221P-201ENST00000459541 99 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 AC008834.1-201ENST00000511612 175 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 SNORA40.9-201ENST00000515895 93 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 RN7SKP49-201ENST00000516675 260 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 Y_RNA.713-201ENST00000517013 96 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 AC012433.1-201ENST00000588916 398 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 AC062037.2-201ENST00000610137 73 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 MIR376A1-201ENST00000616574 68 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.63□□□□□ -2.15
RFT1Q96AA3 MIR219B-201ENST00000637023 88 ntBASIC1.63□□□□□ -2.15
RFT1Q96AA3 AC010615.1-201ENST00000594254 1764 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 Y_RNA.60-201ENST00000362831 98 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 U3.8-201ENST00000363675 217 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 RNU6-379P-201ENST00000363813 104 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 RNU1-96P-201ENST00000364163 162 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 SNORA63D-201ENST00000364359 132 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 Y_RNA.237-201ENST00000364439 102 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 SNORD87-201ENST00000364849 89 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 Y_RNA.401-201ENST00000383965 117 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 Y_RNA.415-201ENST00000384012 112 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 Y_RNA.439-201ENST00000384119 94 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 RNU6-713P-201ENST00000384761 107 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 Y_RNA.602-201ENST00000410535 92 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 RNU6-57P-201ENST00000411348 103 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 ELOCP21-201ENST00000412558 336 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 HMGN2P34-201ENST00000437647 269 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 RNU6-1132P-201ENST00000459214 107 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 RPL23AP63-201ENST00000498752 471 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 RNU6-1271P-201ENST00000517049 105 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 MIR2355-201ENST00000517199 87 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.62□□□□□ -2.15
RFT1Q96AA3 MIR4423-201ENST00000580922 80 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 MIR3128-201ENST00000581957 66 ntBASIC1.62□□□□□ -2.15
RFT1Q96AA3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.62□□□□□ -2.15
RFT1Q96AA3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.62□□□□□ -2.15
RFT1Q96AA3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RFT1Q96AA3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RFT1Q96AA3 MTND5P35-201ENST00000557537 1720 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
RFT1Q96AA3 SNORD113-8-201ENST00000363497 74 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 Y_RNA.152-201ENST00000363578 100 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 RNU6-20P-201ENST00000384106 107 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 Y_RNA.562-201ENST00000384695 113 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 MIR520A-201ENST00000384862 85 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 MIR548B-201ENST00000385247 97 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 AC019129.1-201ENST00000403786 261 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 MRPL35P1-201ENST00000404272 572 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 AC016909.1-201ENST00000415916 166 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 AC008134.1-201ENST00000420943 193 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.61□□□□□ -2.15
RFT1Q96AA3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.61□□□□□ -2.15
RFT1Q96AA3 AC003989.2-201ENST00000440224 169 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 TRBVB-201ENST00000477100 408 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 RNU6-496P-201ENST00000516145 99 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 RNU6-388P-201ENST00000517012 105 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 RNU6-389P-201ENST00000517048 105 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 AC025647.1-201ENST00000517879 253 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 DEFB108E-201ENST00000524692 240 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 MIR4419B-201ENST00000577260 68 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 MIR3198-2-201ENST00000577868 80 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 MIR4285-201ENST00000581001 85 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 AC010999.1-201ENST00000611856 324 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 AL590808.1-201ENST00000618696 141 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 AC078938.1-201ENST00000620993 318 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.61□□□□□ -2.15
RFT1Q96AA3 AC064859.1-201ENST00000624741 174 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms