Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.287-201ENST00000364853 94 ntBASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 Y_RNA.304-201ENST00000365011 112 ntBASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 SNORA80E-201ENST00000384744 137 ntBASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 SNORA26.5-201ENST00000391215 123 ntBASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 MIR1262-201ENST00000408276 93 ntBASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 AC060773.1-201ENST00000421698 310 ntBASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 RN7SL636P-201ENST00000497504 294 ntBASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 RNA5SP20-201ENST00000515976 84 ntBASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 RNU6-1337P-201ENST00000516525 95 ntBASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 RNU6-182P-201ENST00000516970 105 ntBASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 Z83818.1-201ENST00000603584 150 ntBASIC2.34□□□□□ -2.03
ATG4AQ8WYN0 CENPCP1-201ENST00000533085 2578 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 RNU6-443P-201ENST00000384780 107 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 RN7SKP284-201ENST00000411002 343 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 AC010154.1-201ENST00000425857 269 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 RPS20P10-201ENST00000451209 253 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 Y_RNA.644-201ENST00000459006 113 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 Y_RNA.674-201ENST00000516362 113 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 CBX3P4-201ENST00000538909 354 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 AC098479.1-201ENST00000609225 154 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 U2.15-201ENST00000611544 191 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 U2.16-201ENST00000613119 191 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 U2.12-201ENST00000613778 191 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 U2.20-201ENST00000613956 192 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 U2.9-201ENST00000615427 191 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 U2.11-201ENST00000616345 191 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 U2.2-201ENST00000616535 191 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 U2.3-201ENST00000617785 191 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 U2.19-201ENST00000618602 191 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 RNU2-1-201ENST00000618664 191 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 U2.6-201ENST00000619225 191 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 U2.5-201ENST00000619465 191 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 U2.10-201ENST00000620268 191 ntBASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ATG4AQ8WYN0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 MIR449A-201ENST00000362113 91 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 Y_RNA.172-201ENST00000363765 102 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 RNU6-160P-201ENST00000384591 107 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 SUMO1P4-201ENST00000429430 302 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 AL353689.1-201ENST00000438895 199 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 RNU1-131P-201ENST00000458943 161 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 U8.19-201ENST00000459095 133 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 RPS27P22-201ENST00000478056 241 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 AC104435.1-201ENST00000483483 166 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 AC010409.1-201ENST00000487382 476 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 AC024405.2-202ENST00000532731 184 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 CYCSP26-201ENST00000534107 320 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 AC026271.5-201ENST00000577873 130 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 MIR4298-201ENST00000584380 73 ntBASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ATG4AQ8WYN0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 SNORA38-201ENST00000363946 132 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 RNU6-1048P-201ENST00000364054 107 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 Y_RNA.262-201ENST00000364641 102 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 SNORD116-13-201ENST00000384408 92 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 MIR1253-201ENST00000408273 105 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 Y_RNA.793-201ENST00000411222 111 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 AC009310.1-201ENST00000414414 451 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 AC245102.2-201ENST00000448956 180 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 AC011406.1-201ENST00000512440 370 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 RNU6-1146P-201ENST00000516282 102 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 SUMO2P18-201ENST00000518873 252 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 AL137100.2-201ENST00000555786 315 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 MIR4438-201ENST00000585271 93 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 AC004832.4-201ENST00000608952 331 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 AC004792.1-201ENST00000614523 137 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 AC013791.1-201ENST00000616619 62 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 AL365265.1-201ENST00000621045 234 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.31□□□□□ -2.04
ATG4AQ8WYN0 AL356292.1-201ENST00000283110 373 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 RNA5SP289-201ENST00000362332 137 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 snoU2-30.2-201ENST00000362805 70 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 RNU6-899P-201ENST00000363947 107 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 SNORD114-6-201ENST00000364393 72 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 RNU6-117P-201ENST00000365415 107 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 RNU1-148P-201ENST00000384472 162 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 MIR144-201ENST00000384886 86 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 AL355497.1-201ENST00000406262 551 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 OOSP1P1-201ENST00000423265 274 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 PIGPP3-201ENST00000425307 415 ntBASIC2.3□□□□□ -2.04
ATG4AQ8WYN0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms