Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AC092423.1-201ENST00000430165 186 ntBASIC0.47□□□□□ -2.33
CCDC148Q8NFR7 RNU6-1132P-201ENST00000459214 107 ntBASIC0.47□□□□□ -2.33
CCDC148Q8NFR7 HMGN2P26-201ENST00000463169 339 ntBASIC0.47□□□□□ -2.33
CCDC148Q8NFR7 AC018710.1-201ENST00000506509 158 ntBASIC0.47□□□□□ -2.33
CCDC148Q8NFR7 RNU6-1114P-201ENST00000516022 107 ntBASIC0.47□□□□□ -2.33
CCDC148Q8NFR7 RNU6-1291P-201ENST00000516591 104 ntBASIC0.47□□□□□ -2.33
CCDC148Q8NFR7 AC120024.3-201ENST00000603167 156 ntBASIC0.47□□□□□ -2.33
CCDC148Q8NFR7 AC092954.2-201ENST00000609103 430 ntBASIC0.47□□□□□ -2.33
CCDC148Q8NFR7 AL138726.1-201ENST00000614873 333 ntBASIC0.47□□□□□ -2.33
CCDC148Q8NFR7 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.47□□□□□ -2.33
CCDC148Q8NFR7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CCDC148Q8NFR7 RNU4-41P-201ENST00000364426 143 ntBASIC0.46□□□□□ -2.34
CCDC148Q8NFR7 RNU6-407P-201ENST00000365280 104 ntBASIC0.46□□□□□ -2.34
CCDC148Q8NFR7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CCDC148Q8NFR7 RNU6-281P-201ENST00000384212 103 ntBASIC0.46□□□□□ -2.34
CCDC148Q8NFR7 RNU6-1067P-201ENST00000384752 107 ntBASIC0.46□□□□□ -2.34
CCDC148Q8NFR7 ZNF885P-201ENST00000420174 1098 ntBASIC0.46□□□□□ -2.34
CCDC148Q8NFR7 AL137792.2-201ENST00000443484 235 ntBASIC0.46□□□□□ -2.34
CCDC148Q8NFR7 RNU6-496P-201ENST00000516145 99 ntBASIC0.46□□□□□ -2.34
CCDC148Q8NFR7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.46□□□□□ -2.34
CCDC148Q8NFR7 MIR4711-201ENST00000578274 70 ntBASIC0.46□□□□□ -2.34
CCDC148Q8NFR7 AC124303.1-201ENST00000605703 360 ntBASIC0.46□□□□□ -2.34
CCDC148Q8NFR7 AC019193.3-201ENST00000609144 554 ntBASIC0.46□□□□□ -2.34
CCDC148Q8NFR7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.409-201ENST00000383990 98 ntBASIC0.45□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.490-201ENST00000384413 102 ntBASIC0.45□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.553-201ENST00000384670 102 ntBASIC0.45□□□□□ -2.34
CCDC148Q8NFR7 MIR936-201ENST00000401264 98 ntBASIC0.45□□□□□ -2.34
CCDC148Q8NFR7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC148Q8NFR7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC148Q8NFR7 USMG5P1-201ENST00000425964 177 ntBASIC0.45□□□□□ -2.34
CCDC148Q8NFR7 SUMO1P2-201ENST00000452524 304 ntBASIC0.45□□□□□ -2.34
CCDC148Q8NFR7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC148Q8NFR7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.45□□□□□ -2.34
CCDC148Q8NFR7 AL008636.1-201ENST00000625038 1018 ntBASIC0.45□□□□□ -2.34
CCDC148Q8NFR7 AC073544.1-201ENST00000600110 1595 ntBASIC0.45□□□□□ -2.34
CCDC148Q8NFR7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.796-201ENST00000364268 102 ntBASIC0.44□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.799-201ENST00000364992 102 ntBASIC0.44□□□□□ -2.34
CCDC148Q8NFR7 RNU6-596P-201ENST00000365395 98 ntBASIC0.44□□□□□ -2.34
CCDC148Q8NFR7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.44□□□□□ -2.34
CCDC148Q8NFR7 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
CCDC148Q8NFR7 AC067940.1-201ENST00000458411 300 ntBASIC0.44□□□□□ -2.34
CCDC148Q8NFR7 snoU13.18-201ENST00000459483 104 ntBASIC0.44□□□□□ -2.34
CCDC148Q8NFR7 RNU6-1116P-201ENST00000517269 99 ntBASIC0.44□□□□□ -2.34
CCDC148Q8NFR7 ZNF519P2-201ENST00000557032 169 ntBASIC0.44□□□□□ -2.34
CCDC148Q8NFR7 AC023827.1-201ENST00000569247 97 ntBASIC0.44□□□□□ -2.34
CCDC148Q8NFR7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.44□□□□□ -2.34
CCDC148Q8NFR7 7SK.10-201ENST00000621414 298 ntBASIC0.44□□□□□ -2.34
CCDC148Q8NFR7 AC127459.3-201ENST00000624328 466 ntBASIC0.44□□□□□ -2.34
CCDC148Q8NFR7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.135-201ENST00000363439 95 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 RNU6-117P-201ENST00000365415 107 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.530-201ENST00000384587 101 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 RNU1-119P-201ENST00000391122 165 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 MIR873-201ENST00000401120 77 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 MIR1185-1-201ENST00000408598 86 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 AL590632.1-201ENST00000424289 371 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 MTATP6P13-201ENST00000438531 667 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 SEPT14P3-201ENST00000439401 183 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 AL732372.2-207ENST00000445840 183 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 SEPT14P2-201ENST00000453405 183 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 SEPT14P4-201ENST00000513445 186 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.665-201ENST00000516177 98 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 RN7SKP12-201ENST00000516275 143 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.693-201ENST00000516641 110 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.717-201ENST00000517106 92 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 FO082796.1-201ENST00000523795 183 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 AC090617.3-201ENST00000573670 475 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 AC243829.6-201ENST00000612652 106 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 MIR6515-201ENST00000619843 57 ntBASIC0.43□□□□□ -2.34
CCDC148Q8NFR7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.42□□□□□ -2.34
CCDC148Q8NFR7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.42□□□□□ -2.34
CCDC148Q8NFR7 SNORD114-7-201ENST00000362520 77 ntBASIC0.42□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.269-201ENST00000364685 89 ntBASIC0.42□□□□□ -2.34
CCDC148Q8NFR7 RNU6-1237P-201ENST00000384777 107 ntBASIC0.42□□□□□ -2.34
CCDC148Q8NFR7 RNU6-1068P-201ENST00000410958 103 ntBASIC0.42□□□□□ -2.34
CCDC148Q8NFR7 RNU4-57P-201ENST00000515980 135 ntBASIC0.42□□□□□ -2.34
CCDC148Q8NFR7 RNA5SP436-201ENST00000516020 115 ntBASIC0.42□□□□□ -2.34
CCDC148Q8NFR7 RNU11-2P-201ENST00000516898 142 ntBASIC0.42□□□□□ -2.34
CCDC148Q8NFR7 RNU6-1096P-201ENST00000517089 102 ntBASIC0.42□□□□□ -2.34
CCDC148Q8NFR7 MIR6863-201ENST00000636112 90 ntBASIC0.42□□□□□ -2.34
CCDC148Q8NFR7 ZNF299P-201ENST00000406845 1804 ntBASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 MIR410-201ENST00000362222 80 ntBASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 RNA5SP48-201ENST00000363969 126 ntBASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.372-201ENST00000365599 102 ntBASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.373-201ENST00000365600 103 ntBASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.405-201ENST00000383979 100 ntBASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.451-201ENST00000384200 100 ntBASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.508-201ENST00000384502 114 ntBASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.524-201ENST00000384564 100 ntBASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 Y_RNA.561-201ENST00000384694 100 ntBASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 SNORD111-201ENST00000408139 94 ntBASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 RNA5SP193-201ENST00000410353 107 ntBASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 USP9YP16-201ENST00000430287 407 ntBASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 MTND3P23-201ENST00000431980 347 ntBASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 USP9YP23-201ENST00000455085 407 ntBASIC0.41□□□□□ -2.34
CCDC148Q8NFR7 SNORA74.3-201ENST00000517108 154 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms