Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC108740.1-201ENST00000498629 225 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC107401.1-201ENST00000503426 685 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 RNA5SP454-201ENST00000517231 127 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 HIF1AP1-201ENST00000553642 175 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 RAC1P9-201ENST00000604990 392 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC015726.2-201ENST00000620112 122 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 Z69908.1-201ENST00000622603 247 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 RNA5SP264-201ENST00000363115 107 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.02□□□□□ -2.41
SYNE1Q8NF91 BTF3P11-201ENST00000426582 477 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 USP9YP14-201ENST00000430663 563 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 HMGN2P26-201ENST00000463169 339 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 MIR2355-201ENST00000517199 87 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.02□□□□□ -2.41
SYNE1Q8NF91 MIR548AX-201ENST00000580117 73 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC027449.1-201ENST00000608890 407 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC092634.7-201ENST00000621022 103 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 SNORD114-5-201ENST00000362928 70 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.567-201ENST00000384736 106 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 MIR605-201ENST00000385078 83 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.02□□□□□ -2.41
SYNE1Q8NF91 SEPT7P4-201ENST00000437076 306 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 RNU7-41P-201ENST00000515917 61 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 MIR5696-201ENST00000578474 85 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 MIR4742-201ENST00000581069 85 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AL136370.1-201ENST00000608166 691 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC137590.2-201ENST00000619709 240 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC022306.3-201ENST00000619930 550 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 MIR526A1-201ENST00000384897 85 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 MIR586-201ENST00000385035 97 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.02□□□□□ -2.41
SYNE1Q8NF91 RNU2-59P-201ENST00000410482 191 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 RNA5SP494-201ENST00000410653 129 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-325P-201ENST00000411132 105 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 MTCO3P19-201ENST00000415864 321 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC234772.3-201ENST00000602277 528 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AL355073.2-201ENST00000612106 557 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 SNORA43.4-201ENST00000629559 138 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-660P-201ENST00000364566 109 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 RNU6-1029P-201ENST00000384109 107 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 MIR891A-201ENST00000401237 79 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC022616.4-201ENST00000522985 181 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC009094.1-201ENST00000564443 426 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.01□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.375-201ENST00000365625 101 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC073261.1-201ENST00000429409 121 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 HSFY7P-201ENST00000432672 318 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 HSFY8P-201ENST00000437934 318 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 RNU7-172P-201ENST00000517125 64 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AP001372.4-201ENST00000524889 472 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC090617.3-201ENST00000573670 475 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 MIR4703-201ENST00000577728 79 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AL139418.1-201ENST00000613613 177 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AL591926.4-201ENST00000616895 298 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AL450472.1-202ENST00000637286 180 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC134026.1-201ENST00000623249 2239 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 RNU6-1303P-201ENST00000364841 107 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.293-201ENST00000364908 93 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC117470.1-201ENST00000381974 330 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 RNU6V-201ENST00000384105 107 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 RNU6-514P-201ENST00000384208 107 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 RPL30P16-201ENST00000419341 429 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC002429.1-201ENST00000437672 148 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 RPL30P10-201ENST00000488148 337 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.01□□□□□ -2.41
SYNE1Q8NF91 SNORD44.1-201ENST00000363202 61 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 RNU6-1240P-201ENST00000365155 104 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 RNU6-1304P-201ENST00000411374 106 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC002350.1-201ENST00000490759 375 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 RNU7-99P-201ENST00000516271 62 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AF235103.2-201ENST00000525753 346 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 SNORD115-30-201ENST00000364117 82 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.415-201ENST00000384012 112 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.450-201ENST00000384198 113 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 MIR513B-201ENST00000385136 84 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 RPL17P19-201ENST00000489069 552 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 MIR2115-201ENST00000516657 100 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC006600.1-201ENST00000572529 153 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 MIR3681-201ENST00000580089 72 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 MIR7844-201ENST00000616161 122 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 RNU6-82P-201ENST00000363970 107 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 SNORA80D-201ENST00000384488 135 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 MIR644A-201ENST00000385262 94 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 CALM2P3-201ENST00000400429 449 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AC005042.3-201ENST00000453230 174 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 RNU7-63P-201ENST00000459054 62 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AL162730.1-201ENST00000605734 292 ntBASIC0.01□□□□□ -2.41
SYNE1Q8NF91 AL096861.1-201ENST00000610899 123 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms