Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.94□□□□□ -2.1
KLHDC9Q8NEP7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.94□□□□□ -2.1
KLHDC9Q8NEP7 AC009127.3-201ENST00000570531 403 ntBASIC1.94□□□□□ -2.1
KLHDC9Q8NEP7 AC022441.3-201ENST00000605737 136 ntBASIC1.94□□□□□ -2.1
KLHDC9Q8NEP7 AP001282.2-201ENST00000616149 309 ntBASIC1.94□□□□□ -2.1
KLHDC9Q8NEP7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
KLHDC9Q8NEP7 AC010615.1-201ENST00000594254 1764 ntBASIC1.94□□□□□ -2.1
KLHDC9Q8NEP7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
KLHDC9Q8NEP7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
KLHDC9Q8NEP7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 Y_RNA.16-201ENST00000362421 102 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 RNU6-454P-201ENST00000364292 107 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 RNU6-290P-201ENST00000365212 101 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 MIR499A-201ENST00000384903 122 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 RNU2-38P-201ENST00000410856 79 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 AC009238.1-201ENST00000442165 424 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 AC009237.6-201ENST00000446969 424 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 AL137159.1-201ENST00000452808 512 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 RPL23AP3-201ENST00000453844 468 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 SNORD127-201ENST00000458892 86 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 RNU6-1132P-201ENST00000459214 107 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 RNU6-155P-201ENST00000516347 100 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 DEFB108E-201ENST00000524692 240 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 AC023157.2-201ENST00000540596 141 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 U4atac.1-201ENST00000618345 95 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KLHDC9Q8NEP7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 AL391987.6-201ENST00000305671 199 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 Y_RNA.188-201ENST00000363952 111 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 Y_RNA.237-201ENST00000364439 102 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 SNORA16.1-201ENST00000364597 132 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 RNA5SP138-201ENST00000365098 114 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 RNU6-975P-201ENST00000384296 105 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 MIR1185-2-201ENST00000408687 86 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 RNU2-54P-201ENST00000410299 190 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 AC016717.1-201ENST00000448918 286 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 AC090255.1-201ENST00000495779 349 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 AC093259.1-201ENST00000509755 300 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 RNU6-1338P-201ENST00000516328 91 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 RNU6-966P-201ENST00000516479 104 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 AC008749.1-201ENST00000597650 306 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 AC006380.1-201ENST00000603598 186 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 AL590240.4-201ENST00000616908 390 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 AC131280.1-202ENST00000624067 4211 ntBASIC1.92□□□□□ -2.1
KLHDC9Q8NEP7 AC080100.1-201ENST00000624239 5356 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 Y_RNA.14-201ENST00000362415 103 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 Y_RNA.307-201ENST00000365022 117 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 RNU6-418P-201ENST00000384035 107 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 SNORD14D-201ENST00000384390 87 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 Y_RNA.518-201ENST00000384552 113 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 Y_RNA.569-201ENST00000384749 103 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 MIR144-201ENST00000384886 86 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 RNU6-1199P-201ENST00000411249 104 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 RNU6-57P-201ENST00000411348 103 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 POLR2KP2-201ENST00000438155 177 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 SCARNA24.2-201ENST00000516968 130 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 RNU6-1271P-201ENST00000517049 105 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 RNU2-12P-201ENST00000517216 168 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 CBX3P4-201ENST00000538909 354 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 AC012640.5-201ENST00000623897 319 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 snoZ196.1-201ENST00000625269 89 ntBASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
KLHDC9Q8NEP7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.1
KLHDC9Q8NEP7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 MIR335-201ENST00000362173 94 ntBASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 Y_RNA.332-201ENST00000365271 113 ntBASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 Y_RNA.350-201ENST00000365409 98 ntBASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 SNORA53-201ENST00000391141 249 ntBASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 AC123900.1-201ENST00000420390 96 ntBASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 PRELID3BP1-201ENST00000457142 540 ntBASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 RPL39P38-201ENST00000467018 153 ntBASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 SNORA4.4-201ENST00000515921 135 ntBASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 RNU6-948P-201ENST00000516374 107 ntBASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 AC012433.1-201ENST00000588916 398 ntBASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 AC037487.3-201ENST00000606668 112 ntBASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 AL512598.1-201ENST00000610158 273 ntBASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 MIR6895-201ENST00000613497 78 ntBASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 SDR42E1P4-201ENST00000620894 481 ntBASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 AC127459.3-201ENST00000624328 466 ntBASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.9□□□□□ -2.11
KLHDC9Q8NEP7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
KLHDC9Q8NEP7 RNA5SP37-201ENST00000365420 130 ntBASIC1.89□□□□□ -2.11
KLHDC9Q8NEP7 Y_RNA.383-201ENST00000383855 97 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms