Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 SNORA27.4-201ENST00000516650 95 ntBASIC2.81□□□□□ -1.96
SMC1BQ8NDV3 AC025647.1-201ENST00000517879 253 ntBASIC2.81□□□□□ -1.96
SMC1BQ8NDV3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.81□□□□□ -1.96
SMC1BQ8NDV3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.81□□□□□ -1.96
SMC1BQ8NDV3 AC005828.6-201ENST00000606610 232 ntBASIC2.81□□□□□ -1.96
SMC1BQ8NDV3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.81□□□□□ -1.96
SMC1BQ8NDV3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 RNA5SP393-201ENST00000363423 117 ntBASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 RNU6-271P-201ENST00000363858 105 ntBASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 Y_RNA.257-201ENST00000364596 102 ntBASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 RNU6-1240P-201ENST00000365155 104 ntBASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 DEFA7P-201ENST00000382676 285 ntBASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 AC010598.1-201ENST00000510378 103 ntBASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 RPL21P9-201ENST00000556149 474 ntBASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 MIR4446-201ENST00000578505 67 ntBASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 MIR3668-201ENST00000582138 75 ntBASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 AL049779.4-201ENST00000604500 156 ntBASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 AC141273.2-201ENST00000618989 130 ntBASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.8□□□□□ -1.96
SMC1BQ8NDV3 MIR378A-201ENST00000362177 66 ntBASIC2.79□□□□□ -1.96
SMC1BQ8NDV3 SNORD114-7-201ENST00000362520 77 ntBASIC2.79□□□□□ -1.96
SMC1BQ8NDV3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.79□□□□□ -1.96
SMC1BQ8NDV3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.79□□□□□ -1.96
SMC1BQ8NDV3 SNORD65B-201ENST00000459126 73 ntBASIC2.79□□□□□ -1.96
SMC1BQ8NDV3 RNU6-191P-201ENST00000516295 94 ntBASIC2.79□□□□□ -1.96
SMC1BQ8NDV3 RNU6-111P-201ENST00000517179 105 ntBASIC2.79□□□□□ -1.96
SMC1BQ8NDV3 AL162424.1-201ENST00000602325 221 ntBASIC2.79□□□□□ -1.96
SMC1BQ8NDV3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.79□□□□□ -1.96
SMC1BQ8NDV3 AC078938.1-201ENST00000620993 318 ntBASIC2.79□□□□□ -1.96
SMC1BQ8NDV3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 AL159152.1-201ENST00000635019 2587 ntBASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 MIR6073-201ENST00000352083 89 ntBASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 UBE2WP1-201ENST00000362030 340 ntBASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 Y_RNA.65-201ENST00000362846 100 ntBASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 Y_RNA.275-201ENST00000364726 110 ntBASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 RNU1-138P-201ENST00000384093 164 ntBASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 SNORA20B-201ENST00000384220 132 ntBASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 SNORA67.3-201ENST00000384366 140 ntBASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 MIR873-201ENST00000401120 77 ntBASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 AL139109.1-201ENST00000455491 297 ntBASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 RNU4-71P-201ENST00000516258 113 ntBASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 RNU6-856P-201ENST00000516959 98 ntBASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 CYCSP26-201ENST00000534107 320 ntBASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 MIR6845-201ENST00000613182 61 ntBASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 AC006435.5-201ENST00000624486 112 ntBASIC2.78□□□□□ -1.96
SMC1BQ8NDV3 ZNF271P-202ENST00000465539 1970 ntBASIC2.78□□□□□ -1.97
SMC1BQ8NDV3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SMC1BQ8NDV3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SMC1BQ8NDV3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.77□□□□□ -1.97
SMC1BQ8NDV3 Y_RNA.361-201ENST00000365515 120 ntBASIC2.77□□□□□ -1.97
SMC1BQ8NDV3 RNU6-338P-201ENST00000383888 105 ntBASIC2.77□□□□□ -1.97
SMC1BQ8NDV3 RNU6-160P-201ENST00000384591 107 ntBASIC2.77□□□□□ -1.97
SMC1BQ8NDV3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.77□□□□□ -1.97
SMC1BQ8NDV3 MIR1253-201ENST00000408273 105 ntBASIC2.77□□□□□ -1.97
SMC1BQ8NDV3 Y_RNA.679-201ENST00000516416 91 ntBASIC2.77□□□□□ -1.97
SMC1BQ8NDV3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.77□□□□□ -1.97
SMC1BQ8NDV3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.77□□□□□ -1.97
SMC1BQ8NDV3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.77□□□□□ -1.97
SMC1BQ8NDV3 MIR3126-201ENST00000577443 74 ntBASIC2.77□□□□□ -1.97
SMC1BQ8NDV3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 RNU6-740P-201ENST00000364734 105 ntBASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 Y_RNA.539-201ENST00000384635 107 ntBASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 RNU6-443P-201ENST00000384780 107 ntBASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 AL355796.1-201ENST00000406706 323 ntBASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 Y_RNA.590-201ENST00000410140 107 ntBASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 RNU2-61P-201ENST00000411069 191 ntBASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 AC010154.1-201ENST00000425857 269 ntBASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 RNU6-1146P-201ENST00000516282 102 ntBASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 AC087441.2-201ENST00000529141 262 ntBASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 AC009127.3-201ENST00000570531 403 ntBASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 MIR5007-201ENST00000583098 95 ntBASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SMC1BQ8NDV3 SNORA27.1-201ENST00000362604 124 ntBASIC2.75□□□□□ -1.97
SMC1BQ8NDV3 SNORD58.1-201ENST00000391313 66 ntBASIC2.75□□□□□ -1.97
SMC1BQ8NDV3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.75□□□□□ -1.97
SMC1BQ8NDV3 SUMO1P4-201ENST00000429430 302 ntBASIC2.75□□□□□ -1.97
SMC1BQ8NDV3 CR769767.1-201ENST00000436337 346 ntBASIC2.75□□□□□ -1.97
SMC1BQ8NDV3 RPL23AP7-203ENST00000449021 469 ntBASIC2.75□□□□□ -1.97
SMC1BQ8NDV3 AC027419.1-201ENST00000522976 328 ntBASIC2.75□□□□□ -1.97
SMC1BQ8NDV3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SMC1BQ8NDV3 RNU6-407P-201ENST00000365280 104 ntBASIC2.74□□□□□ -1.97
SMC1BQ8NDV3 RNU6-662P-201ENST00000384253 104 ntBASIC2.74□□□□□ -1.97
SMC1BQ8NDV3 RNU6-1289P-201ENST00000384431 106 ntBASIC2.74□□□□□ -1.97
SMC1BQ8NDV3 MIR1262-201ENST00000408276 93 ntBASIC2.74□□□□□ -1.97
SMC1BQ8NDV3 SNORA11.4-201ENST00000408823 129 ntBASIC2.74□□□□□ -1.97
SMC1BQ8NDV3 RNU6-855P-201ENST00000410395 104 ntBASIC2.74□□□□□ -1.97
SMC1BQ8NDV3 AC016909.1-201ENST00000415916 166 ntBASIC2.74□□□□□ -1.97
SMC1BQ8NDV3 RNU1-131P-201ENST00000458943 161 ntBASIC2.74□□□□□ -1.97
SMC1BQ8NDV3 AC005840.1-201ENST00000498412 377 ntBASIC2.74□□□□□ -1.97
SMC1BQ8NDV3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms