Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC023157.2-201ENST00000540596 141 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 AC044792.1-201ENST00000593294 196 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 AC005176.2-201ENST00000596933 147 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 AL078603.1-201ENST00000603824 313 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 AC124312.5-201ENST00000604451 268 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 AL773524.1-201ENST00000614065 229 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 AC022140.2-201ENST00000623500 188 ntBASIC2.07□□□□□ -2.08
USP38Q8NB14 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USP38Q8NB14 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USP38Q8NB14 SNORA33-201ENST00000363664 130 ntBASIC2.06□□□□□ -2.08
USP38Q8NB14 RNU6-450P-201ENST00000364654 107 ntBASIC2.06□□□□□ -2.08
USP38Q8NB14 RNU6-407P-201ENST00000365280 104 ntBASIC2.06□□□□□ -2.08
USP38Q8NB14 Y_RNA.389-201ENST00000383924 113 ntBASIC2.06□□□□□ -2.08
USP38Q8NB14 MIR9-3-201ENST00000385084 90 ntBASIC2.06□□□□□ -2.08
USP38Q8NB14 AL117342.1-201ENST00000404861 406 ntBASIC2.06□□□□□ -2.08
USP38Q8NB14 MIR1302-11-201ENST00000408051 138 ntBASIC2.06□□□□□ -2.08
USP38Q8NB14 MIR1302-9-201ENST00000408365 138 ntBASIC2.06□□□□□ -2.08
USP38Q8NB14 MIR1302-10-201ENST00000408734 138 ntBASIC2.06□□□□□ -2.08
USP38Q8NB14 CST2P1-201ENST00000425770 87 ntBASIC2.06□□□□□ -2.08
USP38Q8NB14 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.06□□□□□ -2.08
USP38Q8NB14 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.06□□□□□ -2.08
USP38Q8NB14 RPL26P26-201ENST00000480251 434 ntBASIC2.06□□□□□ -2.08
USP38Q8NB14 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USP38Q8NB14 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.06□□□□□ -2.08
USP38Q8NB14 MIR4299-201ENST00000577899 72 ntBASIC2.06□□□□□ -2.08
USP38Q8NB14 Y_RNA.772-201ENST00000606692 102 ntBASIC2.06□□□□□ -2.08
USP38Q8NB14 MIR1302-2-201ENST00000607096 138 ntBASIC2.06□□□□□ -2.08
USP38Q8NB14 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
USP38Q8NB14 RNU6-454P-201ENST00000364292 107 ntBASIC2.05□□□□□ -2.08
USP38Q8NB14 RNU4-50P-201ENST00000364361 141 ntBASIC2.05□□□□□ -2.08
USP38Q8NB14 MRPL42P3-201ENST00000401492 326 ntBASIC2.05□□□□□ -2.08
USP38Q8NB14 AC004965.1-201ENST00000413033 213 ntBASIC2.05□□□□□ -2.08
USP38Q8NB14 POLR2J4-204ENST00000418424 324 ntBASIC2.05□□□□□ -2.08
USP38Q8NB14 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.05□□□□□ -2.08
USP38Q8NB14 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.05□□□□□ -2.08
USP38Q8NB14 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.05□□□□□ -2.08
USP38Q8NB14 AC112492.4-201ENST00000456549 352 ntBASIC2.05□□□□□ -2.08
USP38Q8NB14 HMGB3P17-201ENST00000504195 649 ntBASIC2.05□□□□□ -2.08
USP38Q8NB14 Y_RNA.711-201ENST00000516993 102 ntBASIC2.05□□□□□ -2.08
USP38Q8NB14 AL137100.2-201ENST00000555786 315 ntBASIC2.05□□□□□ -2.08
USP38Q8NB14 AC020661.2-201ENST00000560114 134 ntBASIC2.05□□□□□ -2.08
USP38Q8NB14 AC055872.1-201ENST00000570978 278 ntBASIC2.05□□□□□ -2.08
USP38Q8NB14 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.05□□□□□ -2.08
USP38Q8NB14 AC016925.2-201ENST00000605108 242 ntBASIC2.05□□□□□ -2.08
USP38Q8NB14 AL353149.1-201ENST00000610667 244 ntBASIC2.05□□□□□ -2.08
USP38Q8NB14 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.05□□□□□ -2.08
USP38Q8NB14 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
USP38Q8NB14 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
USP38Q8NB14 SNORA20B-201ENST00000384220 132 ntBASIC2.04□□□□□ -2.08
USP38Q8NB14 SNORA8-201ENST00000384574 139 ntBASIC2.04□□□□□ -2.08
USP38Q8NB14 RNA5SP212-201ENST00000391223 107 ntBASIC2.04□□□□□ -2.08
USP38Q8NB14 MRPL35P1-201ENST00000404272 572 ntBASIC2.04□□□□□ -2.08
USP38Q8NB14 RNU6-101P-201ENST00000410323 104 ntBASIC2.04□□□□□ -2.08
USP38Q8NB14 RNU2-20P-201ENST00000410425 191 ntBASIC2.04□□□□□ -2.08
USP38Q8NB14 AC244636.1-201ENST00000421152 228 ntBASIC2.04□□□□□ -2.08
USP38Q8NB14 AC010598.1-201ENST00000510378 103 ntBASIC2.04□□□□□ -2.08
USP38Q8NB14 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.04□□□□□ -2.08
USP38Q8NB14 RNU6-475P-201ENST00000516073 104 ntBASIC2.04□□□□□ -2.08
USP38Q8NB14 RNU1-142P-201ENST00000516682 145 ntBASIC2.04□□□□□ -2.08
USP38Q8NB14 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.04□□□□□ -2.08
USP38Q8NB14 AC084364.2-201ENST00000546924 395 ntBASIC2.04□□□□□ -2.08
USP38Q8NB14 MIR4255-201ENST00000579351 72 ntBASIC2.04□□□□□ -2.08
USP38Q8NB14 AC022432.1-201ENST00000595739 310 ntBASIC2.04□□□□□ -2.08
USP38Q8NB14 AC006380.1-201ENST00000603598 186 ntBASIC2.04□□□□□ -2.08
USP38Q8NB14 AL391987.6-201ENST00000305671 199 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 RNU6-324P-201ENST00000363957 106 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 Y_RNA.202-201ENST00000364083 110 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 RNU6-1019P-201ENST00000364424 107 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 Y_RNA.439-201ENST00000384119 94 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 Y_RNA.458-201ENST00000384240 102 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 AL355796.1-201ENST00000406706 323 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 RNA5SP100-201ENST00000410903 110 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 RNA5SP59-201ENST00000410922 110 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 AC005534.2-201ENST00000431047 433 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.03□□□□□ -2.08
USP38Q8NB14 U8.20-201ENST00000459445 131 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.03□□□□□ -2.08
USP38Q8NB14 RNA5SP220-201ENST00000516298 104 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 RNU6-250P-201ENST00000516958 103 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.03□□□□□ -2.08
USP38Q8NB14 MIR4438-201ENST00000585271 93 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 AL121655.1-201ENST00000605811 308 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 AL359075.3-201ENST00000613288 217 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 U6.115-201ENST00000636045 103 ntBASIC2.03□□□□□ -2.08
USP38Q8NB14 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
USP38Q8NB14 AC010615.1-201ENST00000594254 1764 ntBASIC2.03□□□□□ -2.09
USP38Q8NB14 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
USP38Q8NB14 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
USP38Q8NB14 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.02□□□□□ -2.09
USP38Q8NB14 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
USP38Q8NB14 MIR410-201ENST00000362222 80 ntBASIC2.02□□□□□ -2.09
USP38Q8NB14 SNORA67.5-201ENST00000391036 107 ntBASIC2.02□□□□□ -2.09
USP38Q8NB14 Y_RNA.645-201ENST00000391229 102 ntBASIC2.02□□□□□ -2.09
USP38Q8NB14 AC010409.1-201ENST00000487382 476 ntBASIC2.02□□□□□ -2.09
USP38Q8NB14 RNU6-397P-201ENST00000516226 104 ntBASIC2.02□□□□□ -2.09
USP38Q8NB14 RNU6-155P-201ENST00000516347 100 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms