Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNU6-1310P-201ENST00000384153 107 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 SNORD78.2-201ENST00000391076 69 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 AL627390.1-201ENST00000396055 340 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 AL135790.2-201ENST00000437701 267 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 SNRPGP13-201ENST00000442212 177 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 MRPS10P1-201ENST00000448483 130 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 RNU6-976P-201ENST00000516086 111 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 RNU6-295P-201ENST00000516901 104 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 SNORA31.24-201ENST00000517232 57 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 AC023442.1-201ENST00000531247 422 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 MIR4659A-201ENST00000580269 81 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 AC004467.1-201ENST00000615678 330 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 MIR4272-201ENST00000635924 64 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 U6.115-201ENST00000636045 103 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 U6.92-201ENST00000636464 89 ntBASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CCDC71LQ8N9Z2 MIR410-201ENST00000362222 80 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 Y_RNA.27-201ENST00000362540 103 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 Y_RNA.39-201ENST00000362620 98 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 Y_RNA.80-201ENST00000362996 102 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 Y_RNA.197-201ENST00000364004 102 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 Y_RNA.252-201ENST00000364556 101 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 Y_RNA.813-201ENST00000364639 102 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 Y_RNA.485-201ENST00000384395 102 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 U8.13-201ENST00000390842 128 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 SNORA67.6-201ENST00000391093 99 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 MIR1289-2-201ENST00000408360 111 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 AL354695.1-201ENST00000427935 228 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 RPS26P55-201ENST00000471178 356 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 RNA5SP20-201ENST00000515976 84 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 RNU7-99P-201ENST00000516271 62 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 RNU6-911P-201ENST00000516523 104 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 RNU6-1012P-201ENST00000516606 109 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 RNU4-77P-201ENST00000516692 156 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 RNU7-172P-201ENST00000517125 64 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 RNU7-128P-201ENST00000517247 62 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 AC055872.1-201ENST00000570978 278 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 AL929325.1-201ENST00000603096 117 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 AC073413.2-201ENST00000604332 360 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 AL080274.1-201ENST00000605565 220 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 AC006157.1-201ENST00000611750 366 ntBASIC1.18□□□□□ -2.22
CCDC71LQ8N9Z2 U8.1-201ENST00000362843 134 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 RNU6-626P-201ENST00000363354 107 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 RNU6-20P-201ENST00000384106 107 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 Y_RNA.509-201ENST00000384506 99 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 MRPL35P1-201ENST00000404272 572 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 MIR1323-201ENST00000408090 73 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 MTCO3P19-201ENST00000415864 321 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 AC018865.2-201ENST00000423631 129 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 AC245047.3-201ENST00000429428 127 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 FTH1P12-201ENST00000432137 551 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 AC079140.2-201ENST00000506193 142 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 RNU6-1170P-201ENST00000515974 106 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 RNA5SP61-201ENST00000516453 100 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 MIR3684-201ENST00000579779 74 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 MIR5188-201ENST00000583467 113 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 AC005176.2-201ENST00000596933 147 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 C8orf59P2-201ENST00000603441 271 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 AC022217.4-201ENST00000604389 163 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 AC007485.1-201ENST00000616755 206 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 AC091925.1-201ENST00000623204 462 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 AC006435.5-201ENST00000624486 112 ntBASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC71LQ8N9Z2 MIR302D-201ENST00000362275 68 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 SNORA27.1-201ENST00000362604 124 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 RNU1-22P-201ENST00000363334 158 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 Y_RNA.124-201ENST00000363339 93 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 Y_RNA.431-201ENST00000384086 102 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 RNY1P14-201ENST00000384426 108 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 MIR758-201ENST00000390227 88 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 Y_RNA.604-201ENST00000410574 102 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 MTND1P14-201ENST00000427400 950 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 AL160004.2-201ENST00000432935 350 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 RPS27P1-201ENST00000450552 247 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 RPS26P45-201ENST00000471748 340 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 AC097462.1-201ENST00000514125 324 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 SNORA31.10-201ENST00000516482 106 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 MIR3937-201ENST00000580135 106 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 RPS29P30-201ENST00000600975 111 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 AC240442.1-201ENST00000616055 283 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 AL353997.5-201ENST00000618886 171 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 AL606534.2-204ENST00000635008 178 ntBASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CCDC71LQ8N9Z2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.15□□□□□ -2.22
CCDC71LQ8N9Z2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.101-201ENST00000363154 102 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-136P-201ENST00000384663 107 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-376P-201ENST00000384731 106 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-308P-201ENST00000390957 107 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms